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Schema
Clear Filters
Annotation type
6
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
gene expression
2
target gene predictions
1
caQTL
1
eQTL
Annotation Category
6
cis-regulatory elements
Annotation type Category
5
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
4
bigWig
1
bed bed3
1
bed narrowPeak
File set status
6
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
40
fibroblast
25
endothelial cell
23
macrophage
23
retina
22
GABAergic neuron
21
glutamatergic neuron
21
smooth muscle cell
20
pigmented layer of retina
18
monocyte
17
astrocyte
13
excitatory neuron
12
hepatocyte
10
kidney
10
neural progenitor cell
10
pericyte cell
10
retinal pigment epithelial cell
8
B cell
8
EndoC_BH1
8
T cell
8
erythroblast
8
medium spiny neuron
8
pancreatic beta cell
8
pancreatic ductal cell
8
pericyte
8
vip GABAergic cortical interneuron
7
L2/3 intratelencephalic projecting glutamatergic neuron
7
adipocyte
7
islet of Langerhans
7
keratinocyte
7
oligodendrocyte
7
pancreatic acinar cell
7
pancreatic alpha cell
6
L6 intratelencephalic projecting glutamatergic neuron
6
SGBS preadipocytes
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of lymphatic vessel
6
skeletal muscle satellite cell
6
sncg GABAergic interneuron
6
sst GABAergic interneuron
6
thyroid follicular cell
5
CD8-positive, alpha-beta T cell
5
L5 intratelencephalic projecting glutamatergic neuron
5
cell of skeletal muscle
5
chondrocyte
5
heart
5
inhibitory neuron
5
megakaryocyte
5
osteoblast
5
pancreas
5
pancreatic delta cell
5
progenitor cell
5
pvalb GABAergic interneuron
5
regulatory T cell
5
skeletal muscle fiber
4
L2/3-6 intratelencephalic projecting glutamatergic cortical neuron
4
L4 intratelencephalic projecting glutamatergic neuron
4
adrenal gland glandular cell
4
endocardial cell
4
fibroblast of cardiac tissue
4
hepatic stellate cell
4
liver
4
memory B cell
4
mesothelial cell
4
muscle precursor cell
4
natural killer cell
4
near-projecting glutamatergic cortical neuron
4
oligodendrocyte precursor cell
4
pancreatic stellate cell
4
type II pneumocyte
3
cardiac fibroblast
3
L4/5 intratelencephalic projecting glutamatergic neuron
3
L6 corticothalamic-projecting glutamatergic cortical neuron
3
L6b glutamatergic cortical neuron
3
Microglia
3
Schwann cell
3
T-helper 1 cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
double-positive, alpha-beta thymocyte
3
endothelial cell of vascular tree
3
enteric neuron
3
enterocyte
3
gabaergic neuron
3
glomerular visceral epithelial cell
3
heart left ventricle
3
melanocyte
3
mesenchymal stem cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuron
3
regular atrial cardiac myocyte
3
regular ventricular cardiac myocyte
3
right atrium auricular region
3
skin fibroblast
3
stomach
3
tibial artery
3
tibial nerve
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Ammon's horn
2
B Cell
2
CD4-positive helper T cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Purkinje cell
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
caudate nucleus
2
cell
2
central memory CD8-positive, alpha-beta T cell
2
cholangiocyte
2
choroid plexus epithelial cell
2
ciliated cell
2
ciliated epithelial cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
embryonic blood vessel endothelial progenitor cell
2
endothelial cell of umbilical vein
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fast muscle cell
2
fetal cardiomyocyte
2
frontal cortex
2
gamma-delta T cell
2
glial cell
2
globus pallidus
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
lung multiciliated epithelial cell
2
mammary gland epithelial cell
2
mature NK T cell
2
mature natural killer cell
2
medial ganglionic eminence derived interneuron
2
medulla oblongata
2
medullary thymic epithelial cell(myoid Type IIa)
2
medullary thymic epithelial cell(myoid)
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
midbrain
2
muscle of leg
2
naive regulatory T cell
2
neural cell
2
occipital lobe
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
parietal cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pons
2
putamen
2
renal cortical epithelial cell
2
renal pelvis
2
retinal bipolar neuron
2
schwann cell
2
skeletal muscle myoblast
2
slow muscle cell
2
smooth muscle cell of the esophagus
2
smooth muscle myoblast
2
spinal cord
2
spleen
2
stromal cell
2
subcutaneous adipose tissue
2
superior temporal gyrus
2
vascular associated smooth muscle cell
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
Organ
6
musculature of body
Life stage
1
adult
1
unknown
Date released
3
November, 2021
1
February, 2024
1
July, 2025
1
May, 2022
Software used
6
macs
Encyclopedia version
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
Lab
3
Bing Ren, UCSD
2
Stephen Parker, UMich
1
AMP-T2D consortium
Project
3
AMP
3
ENCODE
Collection Tags
3
AMP
3
T2DKP
1
T2DKP
1
DGA
1
T2D
RFA
3
ENCODE3
2
AMP2
1
AMP
Showing 6 of 6 results
table-tab-icon
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Download
FileSet
DSR034VMG
released
Annotation file set
: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - skeletal muscle satellite cell
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR534XMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of skeletal muscle satellite cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR116URN
released
Annotation file set
: Accessible chromatin annotation of Satellite Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR347TWG
released
Annotation file set
: Accessible chromatin annotation of Fetal Satellite Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR101HMU
released
Annotation file set
: Accessible chromatin annotation of Fetal Satellite Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR724QWN
released
Annotation file set
: Cell type chromatin broad peaks and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP