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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
gene expression
3
target gene predictions
2
chromatin state
2
differential activity
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
in vitro differentiated cells
Biosample term
3
endothelial cell of lymphatic vessel
Organ
196
epithelium
75
connective tissue
58
pancreas
53
eye
49
kidney
41
brain
35
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
9
skin of body
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
6
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
bronchus
3
lymphatic vessel
3
nerve
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
penis
1
tongue
1
trachea
1
urinary bladder
Date released
2
November, 2021
1
April, 2020
Software used
2
macs
Lab
2
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
2
ENCODE
1
LungMap
RFA
2
ENCODE3
1
LungMap2
biosample_type!
in vitro differentiated cells
files.file_type!
bigBed narrowPeak
Showing 3 of 3 results
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Download
FileSet
DSR165PFW
released
Annotation file set
: ATAC-seq peaks in lymphatic endothelial cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR427DYD
released
Annotation file set
: Accessible chromatin annotation of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR093JYI
released
Annotation file set
: Accessible chromatin annotation of Fetal Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE