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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
4
target gene predictions
2
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
tissue
Biosample term
1
foveolar cell of stomach
1
gastric goblet cell
1
parietal cell
1
peptic cell
1
stomach neuroendocrine cell
Organ
180
epithelium
80
connective tissue
45
pancreas
29
kidney
28
vasculature
20
liver
19
brain
19
musculature of body
18
blood vessel
15
eye
intestine
13
lung
13
skin of body
12
blood
12
bodily fluid
10
embryo
9
heart
8
lymph node
7
bone element
7
large intestine
7
mammary gland
6
adrenal gland
6
extraembryonic component
5
artery
5
stomach
4
lymphatic vessel
prostate gland
3
bronchus
3
gonad
3
penis
3
placenta
2
bone marrow
2
esophagus
2
small intestine
2
uterus
2
vein
1
adipose tissue
1
limb
1
lymphoid tissue
1
nose
1
ovary
1
spinal cord
1
testis
1
thymus
1
thyroid gland
1
trachea
Date released
5
November, 2021
Software used
5
macs
Lab
5
Bing Ren, UCSD
Project
5
ENCODE
RFA
5
ENCODE3
biosample_type!
tissue
organ_slims!
intestine
prostate gland
Showing 5 of 5 results
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Download
FileSet
DSR973TTL
released
Annotation file set
: Accessible chromatin annotation of Parietal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR067ONR
released
Annotation file set
: Accessible chromatin annotation of Gastric Neuroendocrine Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR337QFE
released
Annotation file set
: Accessible chromatin annotation of Foveolar Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR347BSL
released
Annotation file set
: Accessible chromatin annotation of Fetal Gastric Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR570UBU
released
Annotation file set
: Accessible chromatin annotation of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE