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Schema
Citing CMDGA
Clear Filters
Annotation type
7
candidate regulatory elements
5
target gene predictions
4
accessible chromatin
4
chromatin state
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
DNase-seq
2
snATAC-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
6
cell line
4
primary cell
2
tissue
Biosample term
1
placental hematopoietic stem cell
1
primordial germ cell
1
trophoblast cell
1
trophoblast giant cell
Organ
159
epithelium
61
connective tissue
36
pancreas
vasculature
23
kidney
17
blood vessel
17
liver
17
musculature of body
11
intestine
9
brain
9
lung
7
eye
7
skin of body
6
adrenal gland
6
extraembryonic component
6
heart
5
mammary gland
5
stomach
4
artery
4
embryo
3
bronchus
3
large intestine
3
lymphatic vessel
3
placenta
2
bone element
2
bone marrow
2
esophagus
2
gonad
2
small intestine
2
uterus
2
vein
1
blood
1
bodily fluid
1
ovary
1
penis
1
thymus
1
thyroid gland
1
trachea
Date released
2
June, 2020
2
November, 2021
Software used
4
macs
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
month_released!
June, 2021
organ_slims!
vasculature
Showing 4 of 4 results
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Download
FileSet
DSR806IKQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Syncitiotrophoblast,Cytotrophoblast,Trophoblast Giant from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR171SFZ
released
Annotation file set
: Accessible chromatin annotation for Placenta Trophoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR027ZPQ
released
Annotation file set
: Accessible chromatin annotation for Gonad Primordial germ cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP