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Citing CMDGA
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Annotation type
13
target gene predictions
12
eQTL
10
chromatin state
8
candidate regulatory elements
6
Fine-mapped variants
5
gene expression
3
variant allelic effects
2
accessible chromatin
2
differential activity
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
7
bed bed3+
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Biosample term
1
adipose tissue
1
adipose-derived mesenchymal stem cell
Organ
52
epithelium
33
connective tissue
23
eye
21
brain
15
kidney
15
pancreas
12
blood
12
bodily fluid
11
musculature of body
10
embryo
10
intestine
10
liver
10
vasculature
8
blood vessel
8
lymph node
8
skin of body
7
large intestine
6
extraembryonic component
6
limb
6
lung
5
bone element
5
heart
5
prostate gland
4
gonad
4
mammary gland
3
artery
3
penis
3
stomach
2
adipose tissue
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
testis
uterus
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nerve
1
nose
1
ovary
1
small intestine
1
spleen
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
ureter
1
urinary bladder
1
vein
Date released
1
June, 2020
1
November, 2022
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
bigWig
month_released!
February, 2021
organ_slims!
uterus
Showing 2 of 2 results
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FileSet
DSR315TSA
released
Annotation file set
: Accessible chromatin of subcutaneous adipose tissue of 11 out of 17 individuals to generate chromatin accessibility profiles
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR817QSX
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Adipose-Derived Mesenchymal Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP