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Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
13
eQTL
13
target gene predictions
12
gene expression
10
chromatin state
6
Fine-mapped variants
3
variant allelic effects
2
accessible chromatin
2
binding sites
2
differential activity
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Biosample term
1
adipose tissue
1
adipose-derived mesenchymal stem cell
Organ
200
epithelium
77
connective tissue
63
pancreas
57
eye
36
kidney
26
vasculature
24
brain
22
musculature of body
21
blood vessel
21
intestine
21
liver
17
heart
15
bone element
15
lung
14
limb
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
3
bronchus
3
penis
3
small intestine
3
uterus
2
adipose tissue
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
ureter
1
urinary bladder
Date released
January, 2020
September, 2018
1
June, 2020
1
November, 2022
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
January, 2020
September, 2018
organ_slims!
extraembryonic component
Showing 2 of 2 results
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Download
FileSet
DSR315TSA
released
Annotation file set
: Accessible chromatin of subcutaneous adipose tissue of 11 out of 17 individuals to generate chromatin accessibility profiles
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR817QSX
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Adipose-Derived Mesenchymal Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP