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Citing CMDGA
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Annotation type
36
candidate regulatory elements
25
chromatin state
21
gene expression
18
target gene predictions
12
differential activity
7
variant allelic effects
4
eQTL
3
accessible chromatin
2
binding sites
1
caQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
capillary endothelial cell
1
endothelial cell of umbilical vein
Organ
8
epithelium
4
vasculature
3
blood vessel
3
connective tissue
3
kidney
3
lung
2
brain
2
pancreas
1
bronchus
1
lymphatic vessel
1
vein
Life stage
1
newborn
Date released
2
April, 2020
1
May, 2020
Software used
macs
Lab
2
Xin Sun, UCSD
1
AMP-T2D consortium
Project
2
LungMap
1
AMP
RFA
2
LungMap2
1
AMP
month_released!
March, 2020
organ_slims!
heart
software_used.software.name!
macs
Showing 3 of 3 results
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FileSet
DSR294KMW
released
Annotation file set
: ATAC-seq peaks in capillary 1 from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR864HPI
released
Annotation file set
: ATAC-seq peaks in capillary 2 from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR603NLX
released
Annotation file set
: Accessible chromatin of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP