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Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
13
eQTL
13
gene expression
13
target gene predictions
10
chromatin state
6
Fine-mapped variants
5
accessible chromatin
3
variant allelic effects
2
binding sites
2
differential activity
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
ATAC-seq
2
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Biosample term
2
adipose tissue
1
adipose-derived mesenchymal stem cell
1
omental fat pad
1
subcutaneous adipose tissue
Organ
212
epithelium
86
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
23
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
adrenal gland
7
mammary gland
5
adipose tissue
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Life stage
1
adult
Date released
3
January, 2020
September, 2018
1
June, 2020
1
November, 2022
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
September, 2018
organ_slims!
adrenal gland
Showing 5 of 5 results
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Download
FileSet
DSR315TSA
released
Annotation file set
: Accessible chromatin of subcutaneous adipose tissue of 11 out of 17 individuals to generate chromatin accessibility profiles
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR817QSX
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Adipose-Derived Mesenchymal Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR809PGU
released
Annotation file set
: Accessible chromatin annotation of adipose omental fat pad from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849UDT
released
Annotation file set
: Adipose subcutaneous accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP