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Annotation type
  • 834target gene predictions
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  • 6cis-regulatory elements
Annotation type Category
  • 3ATAC-seq
  • 3snATAC-seq
Available data
  • 6bed bed3+
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  • 6released
Genome assembly (visualization)
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  • 6Homo sapiens
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Biosample term
  • 2aortic endothelial cell
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  • 289June, 2020
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Software used
  • 6macs
Lab
  • 6AMP-T2D consortium
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  • 6AMP
Collection Tags
  • 3T2D
  • 2AMP
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR025RWZ

    released

    Annotation file set: Accessible chromatin from snATAC-seq of delta cells from human pancreatic islet samples
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR055KAB

    released

    Annotation file set: Accessible chromatin from snATAC-seq of beta cells from human pancreatic islet samples
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR938VDA

    released

    Annotation file set: Accessible chromatin from snATAC-seq of alpha cells from human pancreatic islet samples
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR704VCJ

    released

    Annotation file set: Accessible chromatin of human aortic endothelial cells (HAEC) in response to shear stress forces disturbed flow(DF) using ATAC-Seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR463OXW

    released

    Annotation file set: Accessible chromatin of human aortic endothelial cells (HAEC) in response to shear stress forces unidirectional flow(UF) using ATAC-Seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    TSTSR507522

    released

    Annotation file set: Merged ATAC-seq sites in islets for 23 samples including 4 from Bing Ren at UCSD, 2 from Stephen Parker at UMich, and 17 from Mark McCarthy at Oxford (HP1507 and HP1507UW)
    Lab: AMP-T2D consortium
    Project: AMP
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