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Clear Filters
Annotation type
  • 19candidate regulatory elements
  • 17eQTL
  • 15gene expression
  • 13target gene predictions
  • 10chromatin state
  • 8Fine-mapped variants
  • 7accessible chromatin
  • 4differential activity
  • 3variant allelic effects
  • 2binding sites
  • 1histone modifications
Annotation Category
  • 7cis-regulatory elements
Annotation type Category
  • 5ATAC-seq
  • 2DNase-seq
Available data
  • 7bed bed3+
  • 5bigWig
File set status
  • 7released
Genome assembly (visualization)
  • 7hg19
  • 4GRCh38
Organism
  • 7Homo sapiens
Biosample type
  • 6tissue
  • 1cell line
Biosample term
  • 2adipose tissue
  • 2omental fat pad
  • 2subcutaneous adipose tissue
  • 1adipose-derived mesenchymal stem cell
Organ
  • 212epithelium
  • 88connective tissue
  • 65pancreas
  • 59eye
  • 50kidney
  • 42brain
  • 36vasculature
  • 27musculature of body
  • 26blood vessel
  • 26heart
  • 24liver
  • 21intestine
  • 20limb
  • 15bone element
  • 15lung
  • 13skin of body
  • 12blood
  • 12bodily fluid
  • 12embryo
  • 11artery
  • 10large intestine
  • 9extraembryonic component
  • 8lymph node
  • 8skeleton
  • 8stomach
  • 7adipose tissue
  • 7adrenal gland
  • 7mammary gland
  • 5gonad
  • 5prostate gland
  • 4esophagus
  • 4lymphatic vessel
  • 4placenta
  • 4ureter
  • 3bronchus
  • 3nerve
  • 3penis
  • 3small intestine
  • 3uterus
  • 2bone marrow
  • 2lymphoid tissue
  • 2ovary
  • 2spinal cord
  • 2spleen
  • 2testis
  • 2thymus
  • 2thyroid gland
  • 2vein
  • 1breast
  • 1mouth
  • 1nose
  • 1tongue
  • 1trachea
  • 1urinary bladder
Life stage
  • 3adult
Date released
  • 3January, 2020
  • 2September, 2018
  • 1June, 2020
  • 1November, 2022
Software used
  • 7macs
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 3T2DKP
  • 1CMDGA
  • 1ChIP-Atlas
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR315TSA

    released

    Annotation file set: Accessible chromatin of subcutaneous adipose tissue of 11 out of 17 individuals to generate chromatin accessibility profiles
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR817QSX

    released

    Annotation file set: Accessible chromatin annotation for Adipocyte Adipose-Derived Mesenchymal Stem Cells from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR809PGU

    released

    Annotation file set: Accessible chromatin annotation of adipose omental fat pad from DHS-seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR849UDT

    released

    Annotation file set: Adipose subcutaneous accessible chromatin annotation
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR687BVG

    released

    Annotation file set: Accessible chromatin annotation of adipose white tissue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    TSTSR978YHK

    released

    Annotation file set: ATAC-seq sites in subcutaneous adipose tissue for 1 sample from ENCODE
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    TSTSR419KCH

    released

    Annotation file set: ATAC-seq sites in omental fat pad for 1 sample from ENCODE
    Lab: AMP-T2D consortium
    Project: AMP
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