Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 38 results

FileSet
DSR004159
released
Annotation file set: Accessible chromatin sites for Liver stellate (stellate cells (lipocytes that become myofibroblast-like when liver is injured); high COL3A1 DCN COL6A3)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR903245
released
Annotation file set: Accessible chromatin sites for Liver erythroblast (TFRC)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR325756
released
Annotation file set: Accessible chromatin sites for Liver Kupffer (LGMN Kupffer cells (liver resident macrophages))
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR850071
released
Annotation file set: Accessible chromatin sites for Liver hepatocyte (high AFP ALB APOB)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR059060
released
Annotation file set: Accessible chromatin sites for Liver early erythroblast (cell cycle dependent; high ANK1 TFRC)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR636862
released
Annotation file set: Accessible chromatin sites for Liver hepatocyte (entirely T375_b15_Liver_PCW15; AFP marker)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR892610
released
Annotation file set: Accessible chromatin sites for Liver hepatocyte (high AFP ALB APOB)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR196916
released
Annotation file set: Accessible chromatin sites for Liver erythroblast (ANK1 SLC4A1 ALAS2 TFRC marker)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR920567
released
Annotation file set: Accessible chromatin sites for Liver cholangiocyte (PKHD1 ANXA4 cholangiocyte (secretes bile))
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR057858
released
Annotation file set: Accessible chromatin sites for Liver megakaryocyte (high PECAM1 and TRPC6; ITGA2B (CD41) DNM3 marker)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR487703
released
Annotation file set: Accessible chromatin sites for Liver B cell progenitor (EBF1 PAX5 marker; B lineage cells https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3323878/)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR322122
released
Annotation file set: Accessible chromatin sites for Liver endothelial (LDB2 STAB2 KDR endothelial)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR857723
released
Annotation file set: Accessible chromatin sites for Liver hepatocyte (high AFP ALB APOB)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR578923
released
Annotation file set: Accessible chromatin sites for Liver cycling erythroblast (cycling; ANK1 TFRC SLC4A1)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR084ACR
released
Annotation file set: Accessible chromatin annotation of Hepatocyte from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR274TCU
released
Annotation file set: Accessible chromatin annotation of Fetal Hepatic Stellate Cell from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR947VGN
released
Annotation file set: Accessible chromatin annotation of Fetal Hepatic Endothelial 2 from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR698JKQ
released
Annotation file set: Accessible chromatin annotation of Fetal Hepatic Endothelial 1 from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR303OZW
released
Annotation file set: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab: Karen Mohlke, UNC
Project: AMP
FileSet
DSR614AYG
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin, 320µM palmitic acid and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR961YSK
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR909IMA
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM palmitic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR862SUJ
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR683ANQ
released
Annotation file set: Accessible chromatin of primary hepatocytes in basal media with 0.1nM insulin (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR573JPW
released
Annotation file set: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab: Ines Cebola, Imperial College London
Project: AMP