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Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
54
target gene predictions
50
gene expression
41
candidate regulatory elements
33
differential activity
24
chromatin state
18
eQTL
13
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
1
cell line
1
primary cell
Biosample term
2
islet of Langerhans
2
pancreatic ductal cell
1
pancreas
Organ
46
bodily fluid
45
blood
43
epithelium
31
connective tissue
21
vasculature
18
skin of body
16
blood vessel
16
brain
13
embryo
13
liver
12
lymph node
12
mammary gland
9
lung
8
bone element
8
prostate gland
7
kidney
7
musculature of body
7
penis
6
artery
6
eye
6
intestine
6
large intestine
5
heart
5
pancreas
4
uterus
3
extraembryonic component
3
gonad
3
placenta
3
testis
3
vein
2
adipose tissue
2
bone marrow
2
bronchus
2
limb
2
lymphatic vessel
2
spinal cord
2
trachea
1
spleen
1
thymus
0
esophagus
Date released
4
February, 2021
1
March, 2020
Software used
4
macs
1
spp
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
annotation_type!
accessible chromatin
month_released!
August, 2022
Showing 5 of 5 results
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Download
FileSet
DSR407MJH
released
Annotation file set
: Binding sites annotation for Pancreas PDAC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR081BPN
released
Annotation file set
: Binding sites annotation for Pancreas Pancreatic_islets from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR546ZVV
released
Annotation file set
: Binding sites annotation for Pancreas Pancreas from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR780WQM
released
Annotation file set
: Binding sites annotation for Pancreas HPDE6 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR883333
released
Annotation file set
: Islet TF binding sites (PDX, MAFB, NKX2.2, NKX6.1, FOXA2)
Lab:
Kyle Gaulton, UCSD
Project:
AMP