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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
12
foreskin keratinocyte
8
endothelial cell of umbilical vein
7
keratinocyte
7
mammary epithelial cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
endothelial cell of hepatic sinusoid
6
esophagus squamous epithelium
5
breast epithelium
5
endothelial cell
5
epithelial cell of prostate
5
hepatocyte
5
mammary gland epithelial cell
4
choroid plexus epithelial cell
4
myoepithelial cell of mammary gland
4
retinal pigment epithelial cell
3
dermis lymphatic vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
endothelial cell of lymphatic vessel
3
epithelial cell of proximal tubule
3
kidney tubule cell
3
lung microvascular endothelial cell
3
pulmonary artery endothelial cell
2
brain microvascular endothelial cell
2
endocardial cell
2
epithelial cell of esophagus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
pancreatic ductal cell
2
renal cortical epithelial cell
2
tracheal epithelial cell
1
amniotic epithelial cell
1
aortic endothelial cell
1
cholangiocyte
1
colon epithelial cell
1
endothelial cell of coronary artery
1
epidermal melanocyte
1
epithelial cell of amnion
1
kidney capillary endothelial cell
1
kidney epithelium
1
luminal epithelial cell of mammary gland
1
meso-epithelial cell
1
renal connecting tubule
1
vein endothelial cell
Organ
4
brain
4
epithelium
4
vasculature
Life stage
2
unknown
Date released
2
February, 2021
1
October, 2022
1
September, 2022
Software used
1
chromhmm
1
encode-ccres
1
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
eQTL
Showing 4 of 4 results
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Download
FileSet
DSR600YPJ
released
Annotation file set
: Binding sites annotation for choroid plexus epithelial cell (HCPEpiC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR064DCO
released
Annotation file set
: Candidate regulatory elements for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR982GZF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LCX
released
Annotation file set
: Binding sites annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP