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Schema
Citing CMDGA
Clear Filters
Annotation type
87
histone modifications
19
accessible chromatin
15
gene expression
4
eQTL
4
target gene predictions
3
binding sites
2
candidate regulatory elements
2
hQTL
1
chromatin state
1
meQTL
1
sQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
cell line
1
primary cell
Biosample term
40
stomach
38
heart
33
lung
33
muscle of arm
30
brain
30
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
27
placenta
26
left lung
23
A549
22
right lung
21
thymus
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
17
B cell
16
spinal cord
16
spleen
14
CD4-positive, alpha-beta memory T cell
14
liver
12
MCF-7
12
foreskin keratinocyte
11
foreskin fibroblast
11
heart left ventricle
9
K562
9
breast cancer cell
9
cardiac muscle cell
9
natural killer cell
9
neural progenitor cell
9
sigmoid colon
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
adipose tissue
8
body of pancreas
8
chorionic villus
8
endothelial cell of umbilical vein
8
fibroblast of lung
8
gastrocnemius medialis
8
mononuclear cell
8
muscle of trunk
8
ovary
7
CD8-positive, alpha-beta T cell
7
H9
7
Peyer's patch
7
adipocyte
7
endocrine pancreas
7
keratinocyte
7
layer of hippocampus
7
mammary epithelial cell
7
melanoma
7
neuronal stem cell
7
neurosphere
7
retina
7
trophoblast cell
7
upper lobe of left lung
6
HeLa-S3
6
T-helper 1 cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
endothelial cell of hepatic sinusoid
6
esophagus squamous epithelium
6
fibroblast cell line
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
pancreas
6
psoas muscle
6
right renal pelvis
6
testis
6
thyroid gland
6
transverse colon
5
22Rv1
5
HEK293
5
SK-N-SH
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
breast epithelium
5
caudate nucleus
5
endodermal cell
5
endothelial cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
fibroblast
5
fibroblast of dermis
5
foreskin melanocyte
5
gastroesophageal sphincter
5
hepatocyte
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
mesodermal cell
5
omental fat pad
5
osteoblast
5
parathyroid adenoma
5
peripheral blood mononuclear cell
5
regulatory T cell
5
skeletal muscle myoblast
5
skeletal muscle tissue
5
tibial nerve
4
GM06990
4
GM08714
4
GM12864
4
GM12865
4
GM12875
4
GM12878
4
HL-60
4
HepG2
4
IMR-90
4
SK-N-DZ
4
SK-N-MC
4
T cell
4
T-cell
4
WERI-Rb-1
4
angular gyrus
4
aorta
4
ascending aorta
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma multiforme cancer stem cell
4
macrophage
4
mast cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neutrophil
4
prostate cancer cell line
4
prostate gland
4
right renal cortex interstitium
4
temporal lobe
4
thoracic aorta
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caco-2 cell
3
Daoy
3
GM10248
3
GM10266
3
GM12801
3
GM12873
3
GM12874
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
GM23248
3
H1-hESC
3
HAP-1
3
HT-29
3
HUES6
3
HUES64
3
KBM-7
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
NB4
3
NT2-D1 cell
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SJSA1
3
SW480
3
T-cell acute lymphoblastic leukemia
3
T47D
Organ
4
blood
4
bodily fluid
Life stage
2
unknown
Date released
3
February, 2021
1
October, 2022
1
September, 2022
Software used
2
macs
1
chromhmm
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
assembly!
hg18
biosample_term_name!
chronic lymphocytic leukemia cell
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR710IBN
released
Annotation file set
: Binding sites annotation for GM06990 (GM06990) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR864YDM
released
Annotation file set
: Candidate regulatory elements for BSS00395 GM06990 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480OCS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM06990
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR431VOC
released
Annotation file set
: Binding sites annotation for Blood Monocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR599ZRJ
released
Annotation file set
: Binding sites annotation for Blood GM06990 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP