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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
0
binding sites
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
tissue
2
cell line
Biosample term
27
common myeloid progenitor, CD34-positive
23
A549
20
hematopoietic multipotent progenitor cell
14
B cell
14
CD4-positive, alpha-beta memory T cell
12
MCF-7
12
foreskin keratinocyte
11
foreskin fibroblast
9
K562
9
breast cancer cell
9
cardiac muscle cell
9
neural progenitor cell
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
endothelial cell of umbilical vein
8
fibroblast of lung
8
mononuclear cell
7
CD8-positive, alpha-beta T cell
7
H9
7
keratinocyte
7
mammary epithelial cell
7
melanoma
7
neurosphere
6
HeLa-S3
6
T-helper 1 cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
6
natural killer cell
6
regulatory T cell
6
skeletal muscle myoblast
5
22Rv1
5
HEK293
5
HepG2
5
SK-N-SH
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
endodermal cell
5
epithelial cell of prostate
5
fibroblast of dermis
5
foreskin melanocyte
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
mesodermal cell
5
neuronal stem cell
5
osteoblast
5
peripheral blood mononuclear cell
5
prostate cancer cell line
4
GM06990
4
GM08714
4
GM12864
4
GM12865
4
GM12875
4
GM12878
4
HL-60
4
IMR-90
4
SK-N-DZ
4
SK-N-MC
4
T cell
4
T-cell
4
WERI-Rb-1
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma multiforme cancer stem cell
4
hepatocyte
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neutrophil
4
retinal pigment epithelial cell
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caco-2 cell
3
Daoy
3
GM10248
3
GM10266
3
GM12801
3
GM12873
3
GM12874
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
GM23248
3
H1-hESC
3
HAP-1
3
HT-29
3
HUES6
3
HUES64
3
KBM-7
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
NB4
3
NT2-D1 cell
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SJSA1
3
SW480
3
T-cell acute lymphoblastic leukemia
3
T47D
3
Tumor-derived cell line
3
acute myeloid leukemia
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
ectodermal cell
3
embryonic stem cell
3
endometrium adenocarcinoma
3
epithelial cell of proximal tubule
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
liposarcoma
3
lung microvascular endothelial cell
3
mesendoderm
3
myotube
3
naive T cell
3
neural cell
3
pulmonary artery endothelial cell
3
skin fibroblast
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
Burkitt's lymphoma
2
C4-2B
2
COLO-320 cell
2
Caki2
2
DND-41
2
DND-41 cell
2
DOHH2
2
ECC-1
2
EH
2
EL
2
ELF-1
2
ELR
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G401
2
GM04503
2
GM04504
2
GM10847
2
GM12872
2
GM13976
2
GM13977
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM20000
2
GM23338
2
H4
2
H54
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HCT116
2
HEK293-T-REx cell
2
HFF-Myc
2
HK-2 cell
2
HS-27A
2
HS-5
2
HS-SY-2 cell
2
HT1080
2
HUES48
2
HuH-7
2
Ishikawa
Disease term
1
clear cell renal carcinoma
Organ
2
kidney
Life stage
2
adult
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
tissue
Showing 2 of 2 results
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Download
FileSet
DSR461KQV
released
Annotation file set
: Candidate regulatory elements for BSS00160 Caki2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR162JPE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Caki2
Lab:
AMP-T2D consortium
Project:
AMP