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Schema
Citing CMDGA
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Annotation type
2
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
21
stomach
19
heart
17
lung
17
muscle of arm
16
kidney
15
large intestine
15
muscle of back
14
adrenal gland
14
brain
14
common myeloid progenitor, CD34-positive
14
muscle of leg
14
small intestine
13
left lung
13
placenta
11
renal cortex interstitium
11
right lung
10
hematopoietic multipotent progenitor cell
10
renal pelvis
10
right kidney
10
spleen
10
thymus
9
B cell
9
breast cancer cell
9
foreskin fibroblast
9
left kidney
9
spinal cord
8
CD4-positive, alpha-beta T cell
8
cardiac muscle cell
8
foreskin keratinocyte
7
CD8-positive, alpha-beta T cell
7
MCF-7
7
liver
7
mammary epithelial cell
7
melanoma
7
neuronal stem cell
6
H9
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
fibroblast cell line
6
heart left ventricle
6
natural killer cell
5
A549
5
CD4-positive, alpha-beta memory T cell
5
adipocyte
5
endothelial cell
5
fibroblast
5
fibroblast of lung
5
keratinocyte
5
neural progenitor cell
5
peripheral blood mononuclear cell
5
prostate cancer cell line
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
5
testis
5
upper lobe of left lung
4
CD14-positive monocyte
4
HEK293
4
HepG2
4
Peyer's patch
4
T-cell
4
WI38
4
body of pancreas
4
bronchial epithelial cell
4
cardiac fibroblast
4
chorionic villus
4
dermis blood vessel endothelial cell
4
esophagus squamous epithelium
4
foreskin melanocyte
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
glioblastoma multiforme cancer stem cell
4
layer of hippocampus
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
macrophage
4
mast cell
4
mesodermal cell
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neurosphere
4
osteoblast
4
ovary
4
pancreas
4
prostate gland
4
retina
4
right renal pelvis
4
skeletal muscle myoblast
4
thyroid gland
4
transverse colon
4
trophoblast cell
3
22Rv1
3
GM06990
3
GM08714
3
GM12801
3
GM12864
3
GM12865
3
GM12873
3
GM12874
3
GM12875
3
GM12878
3
HL-60
3
HeLa-S3
3
IMR-90
3
K562
3
LNCAP
3
MCF 10A
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
breast epithelium
3
choroid plexus epithelial cell
3
dermal fibroblast
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
endocrine pancreas
3
endodermal cell
3
endothelial cell of lymphatic vessel
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
heart right ventricle
3
hepatocyte
3
liposarcoma
3
mesenchymal stem cell
3
myotube
3
omental fat pad
3
parathyroid adenoma
3
psoas muscle
3
regulatory T cell
3
retinal pigment epithelial cell
3
right renal cortex interstitium
3
skeletal muscle tissue
3
smooth muscle cell
3
substantia nigra
3
suprapubic skin
3
synovial sarcoma cell
3
temporal lobe
3
tibial nerve
3
triple-negative breast cancer
3
trophoblast
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12872
2
GM12891
2
GM12892
2
GM13976
2
GM13977
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
GM20000
2
GM23248
2
H1-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HFF-Myc
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES64
2
Ishikawa
2
Jurkat
2
KBM-7
Organ
3
blood
3
bodily fluid
Life stage
1
unknown
Date released
2
February, 2021
1
October, 2022
Software used
1
chromhmm
1
encode-ccres
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
September, 2022
Showing 3 of 3 results
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Download
FileSet
DSR050ZZL
released
Annotation file set
: Binding sites annotation for GM12873 (GM12873) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR825XED
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM12873
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR098DJN
released
Annotation file set
: Binding sites annotation for Blood GM12873 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP