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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
40
stomach
38
heart
33
lung
33
muscle of arm
30
brain
30
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
27
placenta
26
left lung
22
A549
22
right lung
21
thymus
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
17
B cell
16
spleen
15
spinal cord
14
CD4-positive, alpha-beta memory T cell
14
liver
12
foreskin keratinocyte
11
MCF-7
11
heart left ventricle
10
sigmoid colon
9
breast cancer cell
9
foreskin fibroblast
9
natural killer cell
9
neural progenitor cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
K562
8
adipose tissue
8
body of pancreas
8
cardiac muscle cell
8
chorionic villus
8
gastrocnemius medialis
8
mononuclear cell
8
muscle of trunk
8
ovary
8
trophoblast cell
7
CD8-positive, alpha-beta T cell
7
H9
7
Peyer's patch
7
adipocyte
7
endocrine pancreas
7
endothelial cell of umbilical vein
7
keratinocyte
7
layer of hippocampus
7
melanoma
7
neuronal stem cell
7
neurosphere
7
psoas muscle
7
retina
7
testis
7
transverse colon
7
upper lobe of left lung
6
T-helper 1 cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
endothelial cell of hepatic sinusoid
6
esophagus squamous epithelium
6
fibroblast cell line
6
fibroblast of lung
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
mammary epithelial cell
6
pancreas
6
prostate gland
6
regulatory T cell
6
right renal pelvis
6
skeletal muscle tissue
6
tibial nerve
5
22Rv1
5
HeLa-S3
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
breast epithelium
5
caudate nucleus
5
endodermal cell
5
endothelial cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
foreskin melanocyte
5
gastroesophageal sphincter
5
hepatocyte
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
mesodermal cell
5
omental fat pad
5
parathyroid adenoma
5
peripheral blood mononuclear cell
5
prostate cancer cell line
5
right renal cortex interstitium
5
skeletal muscle myoblast
5
substantia nigra
5
temporal lobe
4
HEK293
4
HepG2
4
SK-N-DZ
4
SK-N-SH
4
T cell
4
T-cell
4
angular gyrus
4
aorta
4
ascending aorta
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
eye
4
fibroblast
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
glioblastoma multiforme cancer stem cell
4
macrophage
4
mast cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neutrophil
4
osteoblast
4
stomach smooth muscle
4
subcutaneous abdominal adipose tissue
4
thoracic aorta
4
tongue
4
trophoblast
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Daoy
3
GM06990
3
GM08714
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
HUES6
3
HUES64
3
IMR-90
3
KBM-7
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SJSA1
3
SK-N-MC
3
SW480
3
T-cell acute lymphoblastic leukemia
3
T47D
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
cardiac fibroblast
3
cerebellum
3
chorion membrane
3
choroid plexus epithelial cell
3
coronary artery
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
ectodermal cell
3
embryonic stem cell
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
Organ
3
lung
Life stage
2
embryonic
Date released
2
February, 2021
1
September, 2022
Software used
chromhmm
1
encode-ccres
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
thyroid gland
software_used.software.name!
chromhmm
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR446ATU
released
Annotation file set
: Candidate regulatory elements for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249FPB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE IMR-90
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR268PHG
released
Annotation file set
: Binding sites annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP