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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
2
target gene predictions
0
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
40
stomach
38
heart
33
lung
33
muscle of arm
30
brain
30
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
27
placenta
26
left lung
23
A549
22
right lung
21
thymus
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
17
B cell
16
spinal cord
16
spleen
14
CD4-positive, alpha-beta memory T cell
14
liver
12
MCF-7
12
foreskin keratinocyte
11
foreskin fibroblast
11
heart left ventricle
10
sigmoid colon
9
breast cancer cell
9
cardiac muscle cell
9
natural killer cell
9
neural progenitor cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
adipose tissue
8
body of pancreas
8
chorionic villus
8
endothelial cell of umbilical vein
8
fibroblast of lung
8
gastrocnemius medialis
8
mononuclear cell
8
muscle of trunk
8
ovary
8
testis
8
trophoblast cell
8
upper lobe of left lung
7
CD8-positive, alpha-beta T cell
7
H9
7
Peyer's patch
7
adipocyte
7
endocrine pancreas
7
keratinocyte
7
layer of hippocampus
7
mammary epithelial cell
7
melanoma
7
neuronal stem cell
7
neurosphere
7
psoas muscle
7
retina
7
thyroid gland
7
transverse colon
6
HeLa-S3
6
T-helper 1 cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
endothelial cell of hepatic sinusoid
6
esophagus squamous epithelium
6
fibroblast cell line
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
pancreas
6
prostate gland
6
regulatory T cell
6
right renal pelvis
6
skeletal muscle myoblast
6
skeletal muscle tissue
6
tibial nerve
5
22Rv1
5
HEK293
5
HepG2
5
SK-N-SH
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
breast epithelium
5
caudate nucleus
5
endodermal cell
5
endothelial cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
fibroblast
5
fibroblast of dermis
5
foreskin melanocyte
5
gastroesophageal sphincter
5
hepatocyte
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
mesodermal cell
5
omental fat pad
5
osteoblast
5
parathyroid adenoma
5
prostate cancer cell line
5
right renal cortex interstitium
5
substantia nigra
5
temporal lobe
4
GM08714
4
GM12864
4
GM12865
4
IMR-90
4
SK-N-DZ
4
SK-N-MC
4
T cell
4
T-cell
4
WERI-Rb-1
4
angular gyrus
4
aorta
4
ascending aorta
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma multiforme cancer stem cell
4
macrophage
4
mast cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neutrophil
4
retinal pigment epithelial cell
4
smooth muscle cell
4
stomach smooth muscle
4
subcutaneous abdominal adipose tissue
4
thoracic aorta
4
tongue
4
trophoblast
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
Caco-2 cell
3
Daoy
3
GM10248
3
GM10266
3
GM12801
3
GM23248
3
H1-hESC
3
HT-29
3
HUES6
3
HUES64
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NT2-D1 cell
3
OCI-LY1
3
OCI-LY3
3
PC-3
3
PC-9
3
RWPE1
3
SJSA1
3
SW480
3
T-cell acute lymphoblastic leukemia
3
T47D
3
Tumor-derived cell line
3
acute myeloid leukemia
3
cerebellum
3
chorion membrane
3
coronary artery
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
ectodermal cell
3
embryonic stem cell
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
Disease term
2
prostate adenocarcinoma
Organ
blood
9
bodily fluid
3
prostate gland
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
blood
Showing 3 of 3 results
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Download
FileSet
DSR603DZA
released
Annotation file set
: Candidate regulatory elements for BSS01174 LNCaP clone FGC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR829EAT
released
Annotation file set
: Candidate regulatory elements for BSS01173 LNCaP clone FGC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR328SIT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LNCaP clone FGC
Lab:
AMP-T2D consortium
Project:
AMP