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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
candidate regulatory elements
2
chromatin state
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
39
stomach
37
heart
33
muscle of arm
32
lung
30
brain
30
kidney
28
adrenal gland
28
muscle of back
28
small intestine
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
27
placenta
26
left lung
23
A549
22
right lung
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
20
thymus
19
renal pelvis
18
left kidney
16
spinal cord
15
spleen
14
B cell
14
CD4-positive, alpha-beta memory T cell
13
liver
12
MCF-7
12
foreskin keratinocyte
11
foreskin fibroblast
10
heart left ventricle
9
K562
9
breast cancer cell
9
cardiac muscle cell
9
neural progenitor cell
9
sigmoid colon
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
adipose tissue
8
body of pancreas
8
chorionic villus
8
endothelial cell of umbilical vein
8
fibroblast of lung
8
gastrocnemius medialis
8
mononuclear cell
8
muscle of trunk
8
ovary
7
CD8-positive, alpha-beta T cell
7
H9
7
Peyer's patch
7
endocrine pancreas
7
keratinocyte
7
layer of hippocampus
7
mammary epithelial cell
7
melanoma
7
neurosphere
7
retina
7
testis
7
trophoblast cell
7
upper lobe of left lung
6
HeLa-S3
6
T-helper 1 cell
6
bronchial epithelial cell
6
dermis blood vessel endothelial cell
6
endothelial cell of hepatic sinusoid
6
esophagus squamous epithelium
6
fibroblast cell line
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
natural killer cell
6
pancreas
6
prostate gland
6
psoas muscle
6
regulatory T cell
6
right renal pelvis
6
skeletal muscle tissue
6
tibial nerve
6
transverse colon
5
22Rv1
5
HEK293
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
breast epithelium
5
caudate nucleus
5
endodermal cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
fibroblast of dermis
5
foreskin melanocyte
5
gastroesophageal sphincter
5
heart right ventricle
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
mesodermal cell
5
neuronal stem cell
5
omental fat pad
5
osteoblast
5
parathyroid adenoma
5
peripheral blood mononuclear cell
5
prostate cancer cell line
5
right renal cortex interstitium
5
skeletal muscle myoblast
5
temporal lobe
4
GM06990
4
GM08714
4
GM12864
4
GM12865
4
GM12875
4
GM12878
4
HL-60
4
HepG2
4
IMR-90
4
T cell
4
T-cell
4
angular gyrus
4
aorta
4
ascending aorta
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma multiforme cancer stem cell
4
hepatocyte
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuroblastoma cell
4
neutrophil
4
retinal pigment epithelial cell
4
subcutaneous abdominal adipose tissue
4
substantia nigra
4
thoracic aorta
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
Caco-2 cell
3
GM10248
3
GM10266
3
GM12801
3
GM12873
3
GM12874
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
GM23248
3
H1-hESC
3
HAP-1
3
HT-29
3
HUES6
3
HUES64
3
KBM-7
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MM.1S
3
NAMALWA cell
3
NB4
3
NT2-D1 cell
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SJSA1
3
SK-N-MC
3
SK-N-SH
3
SW480
3
T-cell acute lymphoblastic leukemia
3
T47D
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
cerebellum
3
chorion membrane
3
coronary artery
3
dermal fibroblast
Disease term
2
neuroblastoma
Organ
3
brain
Life stage
2
child
young adult
Date released
2
September, 2022
1
October, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
thyroid gland
relevant_life_stage!
young adult
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR744HBG
released
Annotation file set
: Binding sites annotation for SK-N-SH (SK-N-SH) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR277GGH
released
Annotation file set
: Candidate regulatory elements for BSS01571 SK-N-SH from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR410LTV
released
Annotation file set
: Candidate regulatory elements for BSS01562 SK-N-SH from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP