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Schema
Citing CMDGA
Clear Filters
Annotation type
16
histone modifications
10
accessible chromatin
7
gene expression
4
binding sites
1
candidate regulatory elements
1
target gene predictions
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
cell line
1
in vitro differentiated cells
Biosample term
19
heart
17
muscle of arm
15
large intestine
15
lung
15
muscle of back
15
stomach
14
brain
14
kidney
14
muscle of leg
13
left lung
13
placenta
12
small intestine
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
10
thymus
9
breast cancer cell
9
foreskin fibroblast
9
left kidney
9
spinal cord
8
adrenal gland
8
cardiac muscle cell
8
foreskin keratinocyte
7
melanoma
6
H9
6
endothelial cell of umbilical vein
6
fibroblast cell line
5
CD4-positive, alpha-beta memory T cell
5
keratinocyte
5
mammary epithelial cell
5
neural progenitor cell
5
neuronal stem cell
5
prostate cancer cell line
4
HEK293
4
HepG2
4
WI38
4
bronchial epithelial cell
4
chorionic villus
4
common myeloid progenitor, CD34-positive
4
foreskin melanocyte
4
glioblastoma multiforme cancer stem cell
4
left renal cortex interstitium
4
left renal pelvis
4
mesodermal cell
4
muscle of trunk
4
neuroblastoma cell
4
neurosphere
4
osteoblast
4
retina
4
right renal pelvis
4
trophoblast cell
3
22Rv1
3
CD4-positive, alpha-beta T cell
3
GM06990
3
GM08714
3
GM12801
3
GM12864
3
GM12865
3
GM12873
3
GM12874
3
GM12875
3
IMR-90
3
MCF-7
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
cardiac fibroblast
3
choroid plexus epithelial cell
3
dermal fibroblast
3
dermis microvascular lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
endodermal cell
3
epithelial cell of prostate
3
fibroblast of lung
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
heart left ventricle
3
liposarcoma
3
liver
3
myotube
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
retinal pigment epithelial cell
3
right renal cortex interstitium
3
skeletal muscle myoblast
3
spleen
3
synovial sarcoma cell
3
testis
3
triple-negative breast cancer
3
trophoblast
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12872
2
GM12878
2
GM12891
2
GM12892
2
GM13976
2
GM13977
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
GM20000
2
H1-hESC
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HFF-Myc
2
HL-60
2
HS-SY-2 cell
2
HUES6
2
HUES64
2
Jurkat
2
K562
2
MG63
2
Mantle cell lymphoma
2
NAMALWA
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PC-9
2
PFSK-1 cell
2
RKO
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-DZ
2
SK-N-SH_RA
2
SUM-185PE cell
2
T-47D cell
2
T-cell
2
T-helper 17 cell
2
T-lymphocyte
2
Th1 cell
2
U-87 MG
2
U2OS
2
WI-38 cell
2
adipocyte
2
adult acute myeloid leukemia
2
aortic adventitial fibroblast
2
cardiac myoblast
2
cardiovascular progenitor cell
2
chorion
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
dermis blood vessel endothelial cell
2
diffuse large B-cell lymphoma
2
ectodermal cell
2
endothelial cell
2
epithelial cell of proximal tubule
2
erythroblast
2
erythroid progenitor cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
eye
2
fibroblast
2
gastric cancer cell
2
glioblastoma cell
2
heart right ventricle
2
hematopoietic multipotent progenitor cell
2
hepatocyte
2
immortal neural cell line cell
2
islet of Langerhans
2
leukemic stem cell
2
lung fibroblast cell line
Life stage
adult
1
embryonic
Date released
5
February, 2021
September, 2022
Software used
4
macs
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
September, 2022
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR859OBP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE neural progenitor cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR876LWB
released
Annotation file set
: Binding sites annotation for Neural ReN-VM from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR714HQQ
released
Annotation file set
: Binding sites annotation for Neural OF4155 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR876KFB
released
Annotation file set
: Binding sites annotation for Neural Neural_progenitor_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR440BEI
released
Annotation file set
: Binding sites annotation for Neural Fetal_neural_progenitor_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP