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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
0
eQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
22
heart
21
brain
20
A549
20
stomach
18
kidney
17
lung
16
islet of Langerhans
16
muscle of arm
16
placenta
16
small intestine
15
adrenal gland
15
liver
15
muscle of leg
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
thymus
11
adipose tissue
11
hematopoietic multipotent progenitor cell
11
right lung
10
right kidney
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
breast cancer cell
9
heart left ventricle
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
K562
8
MCF-7
8
embryonic stem cell
8
lymphoblastoid cell line
8
macrophage
8
mature neutrophil
8
neural progenitor cell
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
melanoma
7
mononuclear cell
6
T cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
fibroblast cell line
6
foreskin fibroblast
6
keratinocyte
6
left cardiac atrium
6
regulatory T cell
6
subcutaneous adipose tissue
6
tibial nerve
5
CD14-positive, CD16-negative classical monocyte
5
body of pancreas
5
caudate nucleus
5
coronary artery
5
fibroblast of lung
5
foreskin keratinocyte
5
heart right ventricle
5
layer of hippocampus
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
monocyte
5
ovary
5
prostate cancer cell line
5
prostate gland
5
retina
5
sigmoid colon
5
skeletal muscle tissue
5
substantia nigra
5
testis
5
thyroid gland
5
tibial artery
5
transverse colon
5
trophoblast cell
4
CD14-positive monocyte
4
HeLa-S3
4
HepG2
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
ascending aorta
4
bronchial epithelial cell
4
cardiac muscle cell
4
cerebellum
4
chorionic villus
4
endocrine pancreas
4
erythroblast
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
frontal cortex
4
gastrocnemius medialis
4
glioblastoma multiforme cancer stem cell
4
mammary epithelial cell
4
muscle of trunk
4
natural killer cell
4
neuroblastoma cell
4
neutrophil
4
omental fat pad
4
osteoblast
4
pancreas
4
psoas muscle
4
putamen
4
right atrium auricular region
4
skeletal muscle myoblast
4
skin of body
4
temporal lobe
4
upper lobe of left lung
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD4-positive, alpha-beta T cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
H1-hESC
3
HEK293
3
HL-60
3
IMR-90
3
KARPAS-422 cell
3
NAMALWA cell
3
NT2-D1 cell
3
Peyer's patch
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
adipocyte
3
blood cell
3
chorion membrane
3
choroid plexus epithelial cell
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
endothelial cell
3
epithelial cell of prostate
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatocyte
3
iPSC derived cell line
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
liposarcoma
3
naive T cell
3
neuronal stem cell
3
neurosphere
3
retinal pigment epithelial cell
3
right cardiac atrium
3
skin fibroblast
3
synovial sarcoma cell
3
thoracic aorta
3
triple-negative breast cancer
3
trophoblast
3
vagina
2
Ammon's horn
2
BL-2 cell
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18505
2
GM18526
Disease term
1
neuroblastoma
Organ
3
brain
Life stage
1
child
Date released
1
February, 2021
1
October, 2022
1
September, 2022
Software used
2
chromhmm
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
August, 2017
Showing 3 of 3 results
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Download
FileSet
DSR032JQH
released
Annotation file set
: Binding sites annotation for BE(2)-C (BE2_C) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703VXR
released
Annotation file set
: Chromatin states for BSS00102 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR406EPW
released
Annotation file set
: Binding sites annotation for Neural BEBRACKETL2BRACKETR-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP