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Schema
Citing CMDGA
Clear Filters
Annotation type
5
histone modifications
3
binding sites
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
4
hg19
1
GRCh38
1
hg18
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
10
liver
6
endothelial cell of hepatic sinusoid
5
HepG2
3
hepatocyte
2
HuH-7
2
hepatic stellate cell
1
HuH-7.5
1
right lobe of liver
0
A549
Disease term
1
hepatocellular carcinoma
Organ
20
lung
5
liver
Life stage
1
child
Date released
1
August, 2017
1
August, 2021
1
February, 2021
1
October, 2022
1
September, 2022
Software used
3
chromhmm
1
cisgenome
1
e-range
1
macs
Lab
4
AMP-T2D consortium
1
Stephen Parker, UMich
Project
5
AMP
RFA
5
AMP
biosample_term_name!
MCF-7
Showing 5 of 5 results
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FileSet
DSR637TIL
released
Annotation file set
: Binding sites annotation for HepG2 (HepG2) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR533TVB
released
Annotation file set
: Chromatin states for BSS00558 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR366OIY
released
Annotation file set
: Binding sites of ChREBP, TF for liver lipogenesis, in HepG2 cells(PMID:21811631)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR877STJ
released
Annotation file set
: Binding sites annotation for Liver Hep_G2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP