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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
7
endothelial cell of umbilical vein
6
endothelial cell of hepatic sinusoid
4
aorta
3
ascending aorta
3
choroid plexus epithelial cell
3
coronary artery
3
dermis lymphatic vessel endothelial cell
3
fibroblast of pulmonary artery
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
2
pulmonary artery endothelial cell
1
aortic endothelial cell
1
aortic smooth muscle cell
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of coronary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
vein endothelial cell
Organ
3
brain
3
epithelium
3
vasculature
Life stage
1
unknown
Date released
1
February, 2021
1
October, 2022
1
September, 2022
Software used
2
chromhmm
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR600YPJ
released
Annotation file set
: Binding sites annotation for choroid plexus epithelial cell (HCPEpiC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR525PVH
released
Annotation file set
: Chromatin states for BSS00218 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LCX
released
Annotation file set
: Binding sites annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP