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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
3
target gene predictions
2
accessible chromatin
2
eQTL
1
gene expression
1
histone modifications
1
variant allelic effects
0
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
22
heart
20
A549
19
brain
19
stomach
17
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
placenta
15
small intestine
14
adrenal gland
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
thymus
11
hematopoietic multipotent progenitor cell
11
right lung
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
breast cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
B cell
8
K562
8
MCF-7
embryonic stem cell
8
heart left ventricle
8
liver
8
mature neutrophil
8
neural progenitor cell
7
CD8-positive, alpha-beta memory T cell
7
adipose tissue
7
melanoma
7
mononuclear cell
7
spleen
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
fibroblast cell line
6
foreskin fibroblast
6
keratinocyte
6
left cardiac atrium
5
CD14-positive, CD16-negative classical monocyte
5
fibroblast of lung
5
foreskin keratinocyte
5
heart right ventricle
5
mammary gland epithelial cell
5
prostate cancer cell line
5
sigmoid colon
5
trophoblast cell
4
CD14-positive monocyte
4
HeLa-S3
4
HepG2
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
bronchial epithelial cell
4
cardiac muscle cell
4
chorionic villus
4
endocrine pancreas
4
erythroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
gastrocnemius medialis
4
glioblastoma multiforme cancer stem cell
4
layer of hippocampus
4
mammary epithelial cell
4
mesenchymal stem cell
4
muscle of trunk
4
neuroblastoma cell
4
osteoblast
4
ovary
4
prostate gland
4
psoas muscle
4
regulatory T cell
4
retina
4
skeletal muscle myoblast
4
temporal lobe
4
testis
4
thyroid gland
4
tibial nerve
4
transverse colon
4
upper lobe of left lung
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD4-positive, alpha-beta T cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
H1-hESC
3
HEK293
3
HL-60
3
IMR-90
3
KARPAS-422 cell
3
NAMALWA cell
3
NT2-D1 cell
3
Peyer's patch
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
adipocyte
3
ascending aorta
3
caudate nucleus
3
chorion membrane
3
choroid plexus epithelial cell
3
coronary artery
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
islet of Langerhans
3
liposarcoma
3
naive T cell
3
natural killer cell
3
neuronal stem cell
3
neurosphere
3
pancreas
3
retinal pigment epithelial cell
3
right cardiac atrium
3
skeletal muscle tissue
3
skin fibroblast
3
synovial sarcoma cell
3
thoracic aorta
3
tibial artery
3
triple-negative breast cancer
3
trophoblast
2
BL-2 cell
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM23248
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HK-2 cell
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES64
2
HuH-7
2
Jurkat
2
KBM-7
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
Organ
3
brain
Life stage
3
adult
Date released
3
September, 2022
August, 2017
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
embryonic stem cell
month_released!
August, 2017
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR133TZK
released
Annotation file set
: Chromatin states for BSS00175 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR532MZI
released
Annotation file set
: Chromatin states for BSS00174 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR640QCY
released
Annotation file set
: Chromatin states for BSS00173 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP