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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
7
candidate regulatory elements
3
chromatin state
3
target gene predictions
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
cell line
Biosample term
22
heart
19
brain
19
stomach
17
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
placenta
15
small intestine
14
adrenal gland
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
thymus
11
hematopoietic multipotent progenitor cell
11
right lung
10
liver
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
heart left ventricle
8
mature neutrophil
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
adipose tissue
7
endothelial cell of umbilical vein
7
mononuclear cell
7
spinal cord
7
spleen
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
fibroblast of lung
6
left cardiac atrium
5
CD14-positive, CD16-negative classical monocyte
5
foreskin fibroblast
5
foreskin keratinocyte
5
heart right ventricle
5
islet of Langerhans
5
layer of hippocampus
5
mammary epithelial cell
5
mammary gland epithelial cell
5
sigmoid colon
5
skeletal muscle myoblast
5
temporal lobe
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
bronchial epithelial cell
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
erythroblast
4
fibroblast of dermis
4
gastrocnemius medialis
4
keratinocyte
4
mesenchymal stem cell
4
muscle of trunk
4
neural progenitor cell
4
osteoblast
4
ovary
4
pancreas
4
prostate gland
4
psoas muscle
4
regulatory T cell
4
retina
4
testis
4
thyroid gland
4
tibial nerve
4
transverse colon
4
upper lobe of left lung
3
CD4-positive, alpha-beta T cell
3
Peyer's patch
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
duodenal mucosa
3
fibroblast of cardiac tissue
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatocyte
3
inflammatory macrophage
3
mucosa of rectum
3
naive T cell
3
natural killer cell
3
neuronal stem cell
3
neurosphere
3
retinal pigment epithelial cell
3
right cardiac atrium
3
skeletal muscle tissue
3
stomach smooth muscle
3
substantia nigra
3
thoracic aorta
3
tibial artery
3
trophoblast
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
Th1 cell
2
aortic adventitial fibroblast
2
breast epithelium
2
cardiac muscle cell
2
cerebellum
2
choroid plexus epithelial cell
2
colon adenocarcinoma
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
endothelial cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
erythroid progenitor cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast
2
fibroblast of breast
2
foreskin melanocyte
2
frontal cortex
2
germinal matrix
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesendoderm
2
midbrain
2
mononuclear cell of bone marrow
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
myotube
2
neuroblastoma cell line
2
neutrophil
2
omental fat pad
2
parathyroid adenoma
2
peripheral blood-derived erythroblast
2
pulmonary artery endothelial cell
2
rectum smooth muscle tissue
2
renal epithelial cell
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
skin fibroblast
2
tongue
2
tracheal epithelial cell
2
urinary bladder
2
vagina
1
Adipose stromal cell
1
Ammon's horn
1
BICR 31
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD8-Positive T-Lymphocytes
1
CD8-positive, alpha-beta T cell
1
EAhy 926 cell
1
H1-hESC
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
T-lymphoma cell line
1
Th17 cell
1
Th2 cell
1
adipose-derived stem cell
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic endothelial cell
1
aortic smooth muscle cell
1
arm bone
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
atypical teratoid rhabdoid tumor
1
bipolar neuron
1
brain microvascular endothelial cell
1
breast carcinoma
1
caput epididymis
1
cardiac fibroblast
1
cardiac mesoderm primordium
1
cardiac muscle myoblast
1
cerebellar cortex
1
chronic lymphocytic leukemia cell
Organ
4
lung
Life stage
3
adult
Date released
3
September, 2022
1
February, 2021
Software used
3
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
cell line
Showing 4 of 4 results
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Download
FileSet
DSR644DLF
released
Annotation file set
: Chromatin states for BSS01871 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR248YCT
released
Annotation file set
: Chromatin states for BSS01870 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR625XEY
released
Annotation file set
: Chromatin states for BSS01869 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165MZX
released
Annotation file set
: Binding sites annotation for Lung Lung from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP