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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
5
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
0
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
22
heart
20
A549
19
brain
19
stomach
17
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
placenta
15
small intestine
14
adrenal gland
13
large intestine
13
left lung
13
muscle of back
12
thymus
11
right lung
10
common myeloid progenitor, CD34-positive
10
hematopoietic multipotent progenitor cell
10
liver
10
right kidney
9
K562
9
breast cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
MCF-7
8
embryonic stem cell
8
heart left ventricle
8
mature neutrophil
8
neural progenitor cell
7
adipose tissue
7
endothelial cell of umbilical vein
7
melanoma
7
spleen
6
B cell
6
adipocyte
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
6
foreskin fibroblast
6
left cardiac atrium
6
mononuclear cell
5
CD14-positive, CD16-negative classical monocyte
5
CD8-positive, alpha-beta memory T cell
5
HepG2
5
foreskin keratinocyte
5
heart right ventricle
5
islet of Langerhans
5
keratinocyte
5
layer of hippocampus
5
mammary epithelial cell
5
prostate cancer cell line
5
sigmoid colon
5
temporal lobe
5
trophoblast cell
4
GM12878
4
H1-hESC
4
HeLa-S3
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
cardiac muscle cell
4
caudate nucleus
4
chorionic villus
4
erythroblast
4
fibroblast of lung
4
gastrocnemius medialis
4
glioblastoma multiforme cancer stem cell
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
muscle of trunk
4
neuroblastoma cell
4
ovary
4
pancreas
4
prostate gland
4
psoas muscle
4
retina
4
skeletal muscle myoblast
4
testis
4
thyroid gland
4
tibial nerve
4
transverse colon
4
upper lobe of left lung
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD14-positive monocyte
3
CD4-positive, alpha-beta T cell
3
CD4-positive, alpha-beta memory T cell
3
Caco-2 cell
3
GM08714
3
GM12875
3
GM19238
3
GM19239
3
GM19240
3
HEK293
3
HL-60
3
IMR-90
3
NAMALWA cell
3
Peyer's patch
3
SK-N-MC
3
SK-N-SH
3
T cell
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
ascending aorta
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
duodenal mucosa
3
endocrine pancreas
3
endodermal cell
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
liposarcoma
3
mucosa of rectum
3
natural killer cell
3
neuronal stem cell
3
neurosphere
3
osteoblast
3
regulatory T cell
3
right cardiac atrium
3
skin fibroblast
3
stomach smooth muscle
3
substantia nigra
3
synovial sarcoma cell
3
thoracic aorta
3
tibial artery
3
triple-negative breast cancer
3
trophoblast
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
ESC derived cell line
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM23248
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES64
2
HuH-7
2
Jurkat
2
KARPAS-422 cell
2
KBM-7
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NB4
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PANC-1 cell
2
PC-3
2
PFSK-1 cell
2
RPMI8226
Organ
4
intestine
4
large intestine
Life stage
4
adult
Date released
4
September, 2022
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
bronchus
relevant_life_stage!
unknown
Showing 4 of 4 results
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Download
FileSet
DSR160UQZ
released
Annotation file set
: Chromatin states for BSS01851 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR172AJC
released
Annotation file set
: Chromatin states for BSS01850 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096PNG
released
Annotation file set
: Chromatin states for BSS01849 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286PKV
released
Annotation file set
: Chromatin states for BSS01848 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP