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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
binding sites
2
differential activity
1
histone modifications
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
single cell RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
2
cell line
2
primary cell
Biosample term
9
breast cancer cell
7
induced pluripotent stem cell
7
melanoma
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
5
pancreatic ductal cell
5
prostate cancer cell line
4
EndoC_BH1
4
foreskin fibroblast
4
glioblastoma multiforme cancer stem cell
4
keratinocyte
4
mammary epithelial cell
4
neural progenitor cell
4
neuroblastoma cell
3
HepG2
3
MCF-7
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
cardiac muscle cell
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
liposarcoma
3
neuronal stem cell
3
osteoblast
3
pancreatic MUC5B+ductal cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic alpha+beta cell
3
pancreatic beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
pancreatic stellate cell
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
DND-41 cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
Fibroblast
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
Glomerular Capillary Endothelial Cell
2
H1-hESC
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Jurkat
2
K562
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Mantle cell lymphoma
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
NHEK
2
NT2-D1 cell
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
RS4-11 cell
2
Raji cell
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T Cell
2
T-47D cell
2
T-lymphocyte
2
Th1 cell
2
Transitional Principal-Intercalated Cell
2
U-87 MG
2
U2OS
2
Vascular Smooth Muscle Cell / Pericyte
2
WERI-Rb-1
2
WI-38 cell
2
adult acute myeloid leukemia
2
aortic adventitial fibroblast
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
diffuse large B-cell lymphoma
2
endothelial cell
2
endothelial cell of umbilical vein
2
erythroblast
2
erythroid progenitor cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
fibroblast
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
gastric cancer cell
2
glioblastoma cell
2
immortal neural cell line cell
2
islet of Langerhans
2
leukemic stem cell
2
liver
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
mammary gland epithelial cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
myotube
2
neuroblastoma cell line
2
osteosarcoma
2
pancreatic cancer cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
2
epithelium
2
kidney
Life stage
2
adult
Date released
2
September, 2023
1
February, 2021
1
October, 2022
Software used
2
deseq2
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
2
KPMP
Project
2
AMP
2
KPMP
RFA
2
AMP
2
KPMP
organ_slims!
mouth
Showing 4 of 4 results
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Download
FileSet
DSR687HBV
released
Annotation file set
: Differential activity annotation of Parietal Epithelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR470CJS
released
Annotation file set
: Differential activity annotation of Parietal Epithelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR345DXE
released
Annotation file set
: Binding sites annotation for SH-SY5Y cell (SH-SY5Y) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR911OQT
released
Annotation file set
: Binding sites annotation for Neural SH-SY5Y from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP