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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
accessible chromatin
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
3
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
1
cell line
1
primary cell
Biosample term
16
islet of Langerhans
8
liver
7
subcutaneous adipose tissue
6
adipose tissue
4
brain
4
coronary artery
4
putamen
4
right atrium auricular region
4
tibial artery
4
tibial nerve
3
caudate nucleus
3
frontal cortex
3
heart
3
heart left ventricle
3
kidney
3
pancreas
3
prostate gland
3
retina
3
skin of body
3
substantia nigra
2
muscle of leg
2
amygdala
2
anterior cingulate cortex
2
ascending aorta
2
blood
2
body of pancreas
2
cartilage tissue
2
cerebellum
2
cerebellum (Hemisphere)
2
cortex of kidney
2
hypothalamus
2
layer of hippocampus
2
midbrain
2
nucleus accumbens
2
omental fat pad
2
placenta
2
skeletal muscle tissue
2
spleen
2
testis
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
abdominal aorta artery
1
adrenal gland
1
breast
1
breast carcinoma
1
caput epididymis
1
cerebellar hemisphere
1
colon
1
colon sigmoid
1
cortex
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endometrium
1
endometrium cancer
1
epididymis
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fallopian tube
1
first pancreatic bud
1
gastrocnemius medialis(Muscle - Skeletal)
1
globus pallidus
1
heart right ventricle
1
kidney epithelium
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
left ventricle myocardium
1
lung
1
mammary gland
1
medulla oblongata
1
medulloblastoma
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
nephron tubule
1
occipital lobe
1
ovary
1
pituitary gland
1
pons
1
prefrontal cortex
1
renal connecting tubule
1
renal cortex interstitium
1
renal glomerulus
1
renal pelvis
1
respiratory system smooth muscle
1
right kidney
1
right lobe of liver
1
right renal cortex interstitium
1
right renal pelvis
1
skin of forearm
1
skin of prepuce of penis
1
small intestine
1
spinal cord
1
stomach
1
superior temporal gyrus
1
synovial joint
1
thoracic aorta
1
thymus
1
thyroid gland
1
transverse colon
1
trophoblast
1
upper lobe of left lung
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
4
brain
Date released
2
January, 2022
1
February, 2021
1
May, 2020
Software used
2
qTLtools
1
deltasvm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR133CLX
released
Annotation file set
: Binding sites annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP