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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
7
gene expression
2
eQTL
2
histone modifications
1
binding sites
1
variant allelic effects
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
15
islet of Langerhans
9
breast cancer cell
8
liver
8
lymphoblastoid cell line
8
macrophage
7
melanoma
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
6
subcutaneous adipose tissue
5
adipose tissue
5
monocyte
5
prostate cancer cell line
4
glioblastoma multiforme cancer stem cell
4
keratinocyte
4
neural progenitor cell
4
neuroblastoma cell
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
blood cell
3
brain
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
endothelial cell
3
fibroblast
3
iPSC derived cell line
3
liposarcoma
3
mammary epithelial cell
3
neuronal stem cell
3
prostate gland
3
putamen
3
regulatory T cell
3
skin of body
3
substantia nigra
3
synovial sarcoma cell
3
triple-negative breast cancer
2
Burkitt's lymphoma
2
COLO-320 cell
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
HS-SY-2 cell
2
HepG2
2
Jurkat
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
SK-MEL-5 cell
2
SUM-185PE cell
2
T cell
2
T-lymphocyte
2
Th1 cell
2
adult acute myeloid leukemia
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
blood
2
bronchial epithelial cell
2
cardiac muscle cell
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
coronary artery
2
cortex of kidney
2
diffuse large B-cell lymphoma
2
erythroid progenitor cell
2
esophageal squamous cell carcinoma
2
foreskin fibroblast
2
frontal cortex
2
gastric cancer cell
2
hypothalamus
2
immortal neural cell line cell
2
kidney
2
layer of hippocampus
2
leukemic stem cell
2
lung fibroblast cell line
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neuroblastoma cell line
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
osteoblast
2
osteosarcoma
2
pancreas
2
pancreatic cancer cell
2
pancreatic cell line
2
pancreatic ductal cell
2
peripheral blood-derived erythroblast
2
placenta
2
primordial germ cell
2
prostate derived cell line
2
retina
2
right atrium auricular region
2
skeletal muscle tissue
2
spinal cord
2
spleen
2
testis
2
tibial artery
2
tibial nerve
2
tracheal epithelial cell
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A2780 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
Adipose stromal cell
1
Ammon's horn
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
1
B-lymphoblast
1
B-lymphoblastoid cell line
1
B-lymphocyte
1
BCBL-1 cell
1
BE(2)-C
1
BEAS-2B cell
1
BEL-7402 cell
1
BG03
1
BICR 31
1
BJ cell
1
BJAB cell
1
BL-2 cell
1
BL-41 cell
1
BPE cell
1
BT-20 cell
1
BT-474 cell
1
BT-549 cell
1
BeWo cell
1
BxPC-3 cell
1
C1 segment of cervical spinal cord
1
C666-1 cell
1
CA46 cell
1
CAL-51 cell
1
CCLP-1 cell
1
CCRF-CEM cell
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD8-Positive T-Lymphocytes
1
CFPAC-1 cell
1
CHL-1 cell
1
CHLA-90 cell
1
CHP-134 cell
1
CMK
1
COLO 741 cell
1
COLO-800 cell
1
COLO-829 cell
1
COLO205
1
CTV-1 cell
1
CaSki cell
1
Caco-2 cell
1
Caki-1 cell
1
Calu-1 cell
1
Calu-3 cell
1
D283 Med cell
1
D341 Med cell
1
DK cell
1
DLD-1 cell
1
DND-41 cell
1
DOHH-2 cell
1
DU 145 cell
1
Daoy
1
Daudi
1
Detroit562
1
EAhy 926 cell
1
ECC-1
1
EM-3 cell
1
EOL-1 cell
1
EndoC_BH1
1
FaDu cell
1
Farage cell
1
G-401 cell
1
GM00011
1
GM06170
1
GM06990
1
GM08714
Organ
3
kidney
1
epithelium
Life stage
1
adult
Date released
1
August, 2021
1
February, 2021
1
February, 2024
Software used
2
matrix-eQTL
1
macs
Lab
2
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
3
AMP
RFA
2
AMP
1
AMP2
biosample_term_name!
cortex
month_released!
October, 2022
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651LEH
released
Annotation file set
: cis-eQTLs of tubulointerstitial in NEPTUNE cohort
Lab:
AMP-T2D consortium
Project:
AMP