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Schema
Citing CMDGA
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Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
4
eQTL
2
hQTL
2
target gene predictions
1
binding sites
1
meQTL
1
sQTL
Annotation Category
4
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
4
RNA-seq
1
ChIP-seq
Available data
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
7
macrophage
5
monocyte
4
foreskin fibroblast
4
mammary epithelial cell
3
blood cell
3
endothelial cell
3
fibroblast
3
osteoblast
3
regulatory T cell
2
T cell
2
aortic adventitial fibroblast
2
articular chondrocyte
2
bronchial epithelial cell
2
erythroblast
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of villous mesenchyme
2
mononuclear cell of bone marrow
2
myotube
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
peripheral blood-derived erythroblast
2
renal epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle myoblast
2
tracheal epithelial cell
1
Adipose stromal cell
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
Ishikawa
1
Leydig cell
1
Rhabdoid Tumor of the Kidney
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
cardiac muscle cell
1
cardiac muscle myoblast
1
chronic lymphocytic leukemia cell
1
colorectal cancer
1
columnar chondrocyte
1
epithelial cell of proximal tubule
1
erythroid cell
1
erythroid progenitor cell
1
fat cell
1
fibroblast of dermis
1
head and neck squamous cell carcinoma
1
helper T cell
1
hepatocyte
1
induced T-regulatory cell
1
keratinocyte
1
leukemic stem cell
1
mammary gland epithelial cell
1
mast cell
1
mature neutrophil
1
mesenchymal stem cell
1
meso-epithelial cell
1
microglial cell
1
mononuclear cell
1
myofibroblast cell
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neoplastic cell
1
neuronal stem cell
1
pancreatic ductal cell
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
plasma cell
1
pre-B acute lymphoblastic leukemia cell
1
preadipocyte
1
primordial germ cell
1
progenitor cell
1
prostate gland cancer cell
1
pulmonary interstitial fibroblast
1
renal proximal tubule cell
1
sensory neuron
1
small cell ovarian carcinoma cell
1
smooth muscle cell
1
somatic muscle myotube
1
type I muscle cell
1
type II muscle cell
Life stage
1
adult
Date released
3
January, 2022
1
February, 2021
1
May, 2021
Software used
3
qTLtools
1
limix
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
May, 2022
organ_slims!
vasculature
Showing 5 of 5 results
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Download
FileSet
DSR338LAI
released
Annotation file set
: monocyte naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085HYL
released
Annotation file set
: monocyte CD16 naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR583OYR
released
Annotation file set
: monocyte eQTL of studay BLUEPRINT from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR431VOC
released
Annotation file set
: Binding sites annotation for Blood Monocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP