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Schema
Citing CMDGA
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Annotation type
8
candidate regulatory elements
5
target gene predictions
4
chromatin state
3
Fine-mapped variants
2
gene expression
1
eQTL
1
variant allelic effects
0
binding sites
Annotation Category
2
Gene expression levels
Annotation type Category
2
RNA-seq
Available data
2
tsv
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
13
islet of Langerhans
11
cardiomyocytes
11
neural progenitor cell
10
H1-hESC
10
progenitor cell of endocrine pancreas
9
EndoC_BH1
9
breast cancer cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
8
kidney
7
melanoma
6
fibroblast cell line
5
prostate cancer cell line
5
subcutaneous adipose tissue
4
adipose tissue
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
glioblastoma multiforme cancer stem cell
4
heart
4
neuroblastoma cell
4
pancreatic ductal cell
3
HepG2
3
MCF-7
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
hepatocyte(AFP)
3
keratinocyte
3
liposarcoma
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
K562
2
Mantle cell lymphoma
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T-47D cell
2
T-lymphocyte
2
U-87 MG
2
U2OS
2
WERI-Rb-1
2
WI-38 cell
2
adipocyte
2
adult acute myeloid leukemia
2
body of pancreas
2
brain
2
cardiac muscle cell
2
cerebellum
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
diffuse large B-cell lymphoma
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
fallopian tube
2
frontal cortex
2
gastric cancer cell
2
glioblastoma cell
2
hematopoietic multipotent progenitor cell
2
immortal neural cell line cell
2
liver
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
metastatic melanoma
2
neuroblastoma cell line
2
neuronal stem cell
2
omental fat pad
2
osteosarcoma
2
pancreatic cancer cell
2
pancreatic cell line
2
prostate derived cell line
2
prostate gland
2
retina
2
right atrium auricular region
2
smooth muscle cell of the coronary artery
2
spinal cord
2
spleen
2
testis
2
tibial nerve
2
visceral abdominal adipose tissue
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A2780 cell
1
AGS cell
1
ALL-SIL cell
1
Ammon's horn
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
1
B-lymphoblast
1
B-lymphoblastoid cell line
1
B-lymphocyte
1
BCBL-1 cell
1
BEAS-2B cell
1
BEL-7402 cell
1
BG03
1
BICR 31
1
BJAB cell
1
BL-2 cell
1
BL-41 cell
1
BPE cell
1
BT-20 cell
1
BT-474 cell
1
BT-549 cell
1
BeWo cell
1
BxPC-3 cell
1
C1 segment of cervical spinal cord
1
C666-1 cell
1
CA46 cell
1
CAL-51 cell
1
CCLP-1 cell
1
CCRF-CEM cell
1
CD8-Positive T-Lymphocytes
1
CFPAC-1 cell
1
CHL-1 cell
1
CHLA-90 cell
1
CHP-134 cell
1
CMK
1
COLO 741 cell
1
COLO-800 cell
1
COLO-829 cell
1
COLO205
1
CTV-1 cell
1
CaSki cell
1
Caki-1 cell
1
Calu-1 cell
1
Calu-3 cell
1
D283 Med cell
1
D341 Med cell
1
DK cell
Organ
2
pancreas
Life stage
2
adult
Date released
1
February, 2020
1
January, 2020
Software used
2
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
GM18505
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR712VTS
released
Annotation file set
: Gene expression levels of Pancreas body from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR117UDT
released
Annotation file set
: Gene expression summary of TPM of pancreas from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP