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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
4
candidate regulatory elements
3
gene expression
3
target gene predictions
2
chromatin state
2
differential activity
1
binding sites
Annotation Category
3
Gene expression levels
1
cis-regulatory elements
Annotation type Category
3
single cell RNA-seq
1
ChIP-seq
Available data
3
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
cell line
1
in vitro differentiated cells
Biosample term
3
Lymphatic Endothelial Cell
1
dermis microvascular lymphatic vessel endothelial cell
Disease term
1
acute kidney failure
1
chronic kidney disease
Organ
268
epithelium
185
kidney
73
connective tissue
52
vasculature
44
pancreas
38
blood vessel
32
liver
26
brain
23
heart
17
musculature of body
14
adipose tissue
13
skin of body
12
artery
9
mammary gland
7
penis
6
bone element
6
limb
5
embryo
5
uterus
4
eye
4
intestine
4
lung
4
lymphatic vessel
3
blood
3
bodily fluid
3
extraembryonic component
3
gonad
3
large intestine
3
placenta
3
prostate gland
3
vein
2
bone marrow
2
bronchus
2
esophagus
2
nerve
2
spleen
2
stomach
2
testis
2
trachea
1
adrenal gland
1
breast
1
lymphoid tissue
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
spinal cord
1
thymus
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
Life stage
3
adult
Date released
3
September, 2023
1
February, 2021
Software used
3
r
1
macs
Lab
3
KPMP
1
AMP-T2D consortium
Project
3
KPMP
1
AMP
RFA
3
KPMP
1
AMP
biosample_type!
cell line
lab.title!
Katalin Susztak, Upenn
Showing 4 of 4 results
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Download
FileSet
DSR693ABL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR065GDL
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR925JNK
released
Annotation file set
: Gene expression annotation of Lymphatic Endothelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR557WEE
released
Annotation file set
: Binding sites annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP