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Schema
Citing CMDGA
Clear Filters
Annotation type
8
accessible chromatin
8
gene expression
3
differential activity
1
binding sites
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
1
HiC
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
56
HeLa-S3
41
H1-hESC
25
K562
23
heart
21
A549
21
stomach
19
CD14-positive monocyte
19
HFFc6
18
brain
17
adrenal gland
17
lung
17
muscle of arm
17
small intestine
16
kidney
16
placenta
15
thymus
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
12
fibroblast
11
endothelial cell
11
hematopoietic multipotent progenitor cell
11
liver
11
right kidney
11
right lung
10
B cell
10
GM12878
10
adipose tissue
10
keratinocyte
10
pericyte cell
10
pituitary stalk
10
renal pelvis
9
CD4-positive, alpha-beta memory T cell
9
MCF-7
9
breast cancer cell
9
heart left ventricle
9
left kidney
9
neural progenitor cell
9
renal cortex interstitium
9
spinal cord
8
H9
8
adipocyte
8
macrophage
7
CD8-positive, alpha-beta memory T cell
7
cardiac muscle cell
7
endothelial cell of umbilical vein
7
fibroblast cell line
7
foreskin fibroblast
7
hepatocyte
7
lymphocyte
7
mammary gland epithelial cell
7
melanoma
7
mononuclear cell
7
pancreas
7
psoas muscle
7
smooth muscle cell
7
spleen
6
HepG2
6
T cell
6
body of pancreas
6
dendritic cell
6
endothelial cell of hepatic sinusoid
6
fibroblast of lung
6
heart right ventricle
6
olfactory receptor cell
6
ovary
6
pancreatic ductal cell
6
sigmoid colon
5
CD8-positive, alpha-beta T cell
5
HUES8
5
coronary artery
5
fibroblast of cardiac tissue
5
fibroblast of dermis
5
foreskin keratinocyte
5
gastrocnemius medialis
5
iPSC derived cell line
5
mammary epithelial cell
5
mesenchymal stem cell
5
muscle of trunk
5
natural killer cell
5
osteoblast
5
pancreatic delta cell
5
prostate cancer cell line
5
tibial nerve
5
trophoblast cell
4
CyT49
4
GM19238
4
GM19239
4
GM19240
4
IMR-90
4
Jurkat
4
SK-N-SH
4
aorta
4
astrocyte
4
bronchial epithelial cell
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
chorionic villus
4
choroid plexus epithelial cell
4
colon epithelial cell
4
embryonic stem cell
4
endocrine pancreas
4
epithelial cell of prostate
4
erythroblast
4
glioblastoma multiforme cancer stem cell
4
islet of Langerhans
4
layer of hippocampus
4
mesendoderm
4
monocyte
4
myofibroblast cell
4
neuroblastoma cell
4
neuronal stem cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
prostate gland
4
regulatory T cell
4
retina
4
right atrium auricular region
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
BJAB cell
3
CD4-positive, alpha-beta T cell
3
Caco-2 cell
3
EndoC_BH1
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM19099
3
GM19193
3
HAP-1
3
HCT-116 cell
3
HCT116
3
HEK293
3
HL-60
3
HT-29
3
KARPAS-422 cell
3
LoVo cell
3
MCF 10A cell
3
MM.1S
3
NAMALWA cell
3
NT2-D1 cell
3
OCI-LY7
3
PC-9
3
Peyer's patch
3
SK-N-MC
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
THP-1
3
Tumor-derived cell line
3
U937
3
WERI-Rb-1
3
acute myeloid leukemia
3
ascending aorta
3
basal cell
3
breast epithelium
3
chorion membrane
3
cortical cell of adrenal gland
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
esophagus
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
frontal cortex
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
left renal cortex interstitium
3
left renal pelvis
3
liposarcoma
3
luminal epithelial cell of mammary gland
3
mast cell
3
midbrain
3
myotube
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
skeletal muscle myoblast
Organ
2
epithelium
2
pancreas
Date released
1
February, 2021
1
March, 2020
1
May, 2020
Software used
1
deltasvm
1
hiccups
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
medulla oblongata
month_released!
August, 2018
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR170VOW
released
Annotation file set
: Binding sites annotation for Pancreas EndoC-BH1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR871UFR
released
Annotation file set
: Genetic variants with deltaSVM predictions in EndoB-CH1 beta cell ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR373FUA
released
Annotation file set
: A target gene prediction annotation in EndoC_BH1 of DSR433ZII Hi-C
Lab:
AMP-T2D consortium
Project:
AMP