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Schema
Citing CMDGA
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Annotation type
4
chromatin state
3
Fine-mapped variants
2
eQTL
1
gene expression
1
histone modifications
1
target gene predictions
0
binding sites
Annotation Category
1
Target gene links
Annotation type Category
3
ChIP-seq
DNase-seq
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
in vitro differentiated cells
1
stem cell
Biosample term
52
HeLa-S3
39
H1-hESC
19
HFFc6
18
K562
9
breast cancer cell
9
endothelial cell
9
pericyte cell
8
GM12878
7
fibroblast cell line
7
melanoma
6
H9
6
endothelial cell of hepatic sinusoid
6
keratinocyte
6
lymphocyte
6
olfactory receptor cell
6
smooth muscle cell
5
HUES8
5
fibroblast
5
iPSC derived cell line
5
prostate cancer cell line
4
CyT49
4
HepG2
4
foreskin fibroblast
4
glioblastoma multiforme cancer stem cell
4
macrophage
4
mammary epithelial cell
4
neural progenitor cell
4
neuroblastoma cell
4
pancreatic delta cell
4
pancreatic ductal cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
GM18505
3
GM19099
3
GM19193
3
GM19238
3
GM19239
3
GM19240
3
MCF-7
3
Tumor-derived cell line
3
acute myeloid leukemia
3
cardiac muscle cell
3
colon epithelial cell
3
dermal fibroblast
3
endothelial cell of umbilical vein
3
erythroblast
3
islet of Langerhans
3
liposarcoma
3
liver
3
monocyte
3
osteoblast
3
pancreas
3
pancreatic alpha cell
3
pancreatic beta cell
3
psoas muscle
3
synovial sarcoma cell
3
thymus
3
triple-negative breast cancer
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B-lymphoblastoid cell line
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
EndoC_BH1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12891
2
GM12892
2
GM15510
2
GM18526
2
GM18951
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HCT116
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
Mantle cell lymphoma
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T-47D cell
2
T-lymphocyte
2
U-87 MG
2
U2OS
2
WERI-Rb-1
2
WI-38 cell
2
activated CD4-positive, alpha-beta T cell
2
adipose tissue
2
adult acute myeloid leukemia
2
aorta
2
aortic adventitial fibroblast
2
astrocyte
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
cortical cell of adrenal gland
2
diffuse intrinsic pontine glioma
2
embryonic stem cell
2
enteric smooth muscle cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
fibroblast of cardiac tissue
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
gabaergic neuron
2
gastric cancer cell
2
glioblastoma cell
2
glutamatergic neuron
2
heart
2
heart left ventricle
2
heart right ventricle
2
hepatocyte
2
immortal neural cell line cell
2
leukemic stem cell
2
luminal epithelial cell of mammary gland
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
mammary gland epithelial cell
2
mast cell
2
megakaryocyte
2
memory B cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
myotube
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreatic A cell
2
pancreatic acinar cell
2
pancreatic cancer cell
2
pancreatic cell line
2
peripheral blood-derived erythroblast
2
plasma cell
2
primordial germ cell
2
prostate derived cell line
2
prostate gland
2
regulatory T cell
2
renal epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle myoblast
2
skin fibroblast
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
tracheal epithelial cell
2
trophoblast
2
type B pancreatic cell
2
type II pneumocyte
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A2780 cell
1
AGS cell
Date released
1
March, 2020
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
DNase-seq
biosample_type!
in vitro differentiated cells
Showing 1 of 1 results
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Download
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP