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Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
4
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
4
Target gene links
1
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
5
endothelial cell of umbilical vein
Organ
131
epithelium
89
connective tissue
85
embryo
82
brain
82
lung
81
musculature of body
77
kidney
76
bodily fluid
74
blood
74
intestine
59
uterus
49
heart
49
limb
48
skin of body
45
large intestine
41
pancreas
41
vasculature
37
extraembryonic component
33
blood vessel
30
stomach
29
liver
23
small intestine
22
mammary gland
21
adrenal gland
18
placenta
17
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
penis
13
ureter
12
gonad
11
eye
11
lymph node
10
esophagus
10
pituitary gland
10
spinal cord
9
artery
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
5
testis
5
vein
4
mouth
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Life stage
2
newborn
Date released
February, 2021
2
September, 2022
1
March, 2020
1
May, 2021
1
October, 2022
Software used
2
r
1
abc
1
chromhmm
1
hiccups
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
biosample_term_name!
Panc1
month_released!
February, 2021
Showing 5 of 5 results
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Download
FileSet
DSR398JDG
released
Annotation file set
: Binding sites annotation for endothelial cell of umbilical vein (HUVEC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP