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Schema
Citing CMDGA
Clear Filters
Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
4
eQTL
2
binding sites
2
hQTL
2
target gene predictions
1
meQTL
1
sQTL
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
pCHi-C
1
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
55
HeLa-S3
40
H1-hESC
24
K562
21
heart
20
A549
19
HFFc6
19
stomach
17
brain
17
lung
16
muscle of arm
16
small intestine
15
adrenal gland
15
kidney
15
placenta
14
thymus
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
11
hematopoietic multipotent progenitor cell
11
right lung
10
liver
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
GM12878
9
breast cancer cell
9
left kidney
9
neural progenitor cell
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
MCF-7
8
adipose tissue
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
H9
7
fibroblast cell line
7
heart left ventricle
7
lymphocyte
7
melanoma
7
mononuclear cell
7
psoas muscle
6
endothelial cell of hepatic sinusoid
6
foreskin fibroblast
6
keratinocyte
6
olfactory receptor cell
6
sigmoid colon
5
HUES8
5
HepG2
5
endothelial cell of umbilical vein
5
fibroblast of lung
5
foreskin keratinocyte
5
heart right ventricle
5
iPSC derived cell line
5
mammary gland epithelial cell
5
ovary
5
pancreas
5
prostate cancer cell line
5
regulatory T cell
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
GM19238
4
GM19239
4
GM19240
4
T cell
4
aorta
4
body of pancreas
4
bronchial epithelial cell
4
cardiac muscle cell
4
chorionic villus
4
embryonic stem cell
4
endocrine pancreas
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
gastrocnemius medialis
4
glioblastoma multiforme cancer stem cell
4
layer of hippocampus
4
mammary epithelial cell
4
mesenchymal stem cell
4
muscle of trunk
4
natural killer cell
4
neuroblastoma cell
4
osteoblast
4
prostate gland
4
retina
4
skeletal muscle myoblast
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast
4
upper lobe of left lung
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM19099
3
GM19193
3
HCT116
3
HEK293
3
HL-60
3
IMR-90
3
NAMALWA cell
3
NT2-D1 cell
3
Peyer's patch
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
adipocyte
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
chorion membrane
3
choroid plexus epithelial cell
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
endothelial cell
3
epithelial cell of prostate
3
erythroblast
3
esophagus
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
liposarcoma
3
macrophage
3
mesendoderm
3
monocyte
3
naive T cell
3
neuronal stem cell
3
neurosphere
3
neutrophil
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
retinal pigment epithelial cell
3
skeletal muscle tissue
3
skin fibroblast
3
synovial sarcoma cell
3
tibial nerve
3
triple-negative breast cancer
2
Ammon's horn
2
B-lymphoblastoid cell line
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
EndoC_BH1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18507
2
GM18526
2
GM18951
2
GM23248
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HK-2 cell
Date released
2
February, 2021
1
January, 2021
1
May, 2020
Software used
2
macs
abc
1
chicago
1
cicero
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
1
T1D
RFA
3
AMP
1
T1D
biosample_term_name!
CHLA-90 cell
software_used.software.name!
abc
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR689XXD
released
Annotation file set
: Binding sites annotation for Blood Pre-B_lymphoblast_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR431VOC
released
Annotation file set
: Binding sites annotation for Blood Monocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP