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Schema
Citing CMDGA
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Annotation type
2
binding sites
1
accessible chromatin
0
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
13
large intestine
6
sigmoid colon
4
transverse colon
3
HCT116
2
HCT-116 cell
2
HT-29
2
SW480
2
colonic mucosa
2
mucosa of rectum
2
muscle layer of colon
1
RKO
1
colon
1
colon epithelial cell
1
rectum smooth muscle tissue
Organ
2
intestine
2
large intestine
Date released
1
February, 2021
1
October, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
lab.title!
Jesse Engreitz, Stanford University
Showing 2 of 2 results
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Download
FileSet
DSR003UZC
released
Annotation file set
: Binding sites annotation for HCT-116 cell (HCT-116) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR788ZGV
released
Annotation file set
: Binding sites annotation for Digestive tract HCT_116 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP