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Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
19
CD14-positive monocyte
14
common myeloid progenitor, CD34-positive
10
B cell
10
pericyte cell
9
CD4-positive, alpha-beta memory T cell
9
endothelial cell
7
CD8-positive, alpha-beta memory T cell
7
mononuclear cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
fibroblast of lung
6
foreskin fibroblast
6
keratinocyte
6
olfactory receptor cell
6
smooth muscle cell
5
CD8-positive, alpha-beta T cell
5
fibroblast
5
fibroblast of dermis
5
mammary epithelial cell
5
mammary gland epithelial cell
5
natural killer cell
5
osteoblast
5
regulatory T cell
5
trophoblast cell
4
T cell
4
astrocyte
4
bronchial epithelial cell
4
erythroblast
4
fibroblast of cardiac tissue
4
foreskin keratinocyte
4
hepatocyte
4
pancreatic delta cell
4
pancreatic ductal cell
4
skeletal muscle myoblast
3
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
colon epithelial cell
3
epithelial cell of prostate
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
luminal epithelial cell of mammary gland
3
macrophage
3
monocyte
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
retinal pigment epithelial cell
3
skin fibroblast
3
type B pancreatic cell
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
aortic adventitial fibroblast
2
blood vessel smooth muscle cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
epithelial cell of proximal tubule
2
fibroblast of breast
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
mast cell
2
megakaryocyte
2
memory B cell
2
mononuclear cell of bone marrow
2
myoepithelial cell of mammary gland
2
myotube
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
peripheral blood-derived erythroblast
2
plasma cell
2
pulmonary artery endothelial cell
2
renal epithelial cell
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
tracheal epithelial cell
2
type II pneumocyte
1
Adipose stromal cell
1
B cell, CD19-positive
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic endothelial cell
1
aortic smooth muscle cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac fibroblast
1
cardiac muscle myoblast
1
cell
1
chronic lymphocytic leukemia cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
colorectal cancer
1
columnar chondrocyte
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of coronary artery
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
erythroid cell
1
erythroid progenitor cell
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
foreskin melanocyte
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
head and neck squamous cell carcinoma
1
hepatic stellate cell
1
induced T-regulatory cell
1
inflammatory macrophage
1
intestinal tuft cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
leukemic stem cell
1
lung microvascular endothelial cell
1
luteal cell
1
mammary stem cell
1
mature NK T cell
1
mature neutrophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
meso-epithelial cell
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
myofibroblast cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
neoplastic cell
1
neuronal stem cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
plasmacytoid dendritic cell
1
pre-B acute lymphoblastic leukemia cell
1
preadipocyte
1
primordial germ cell
1
prostate gland cancer cell
1
pulmonary interstitial fibroblast
1
regular atrial cardiac myocyte
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
renal proximal tubule cell
1
respiratory goblet cell
1
schwann cell
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
small cell ovarian carcinoma cell
Date released
2
October, 2022
1
January, 2021
1
May, 2020
1
May, 2021
Software used
2
chromhmm
1
abc
1
chicago
1
cicero
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Kyle Gaulton, UCSD
Project
4
AMP
1
T1D
RFA
4
AMP
1
T1D
Showing 5 of 5 results
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Download
FileSet
DSR135IUV
released
Annotation file set
: Binding sites annotation for erythroblast (PBDEFetal) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273PAT
released
Annotation file set
: Binding sites annotation for erythroblast (PBDE) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR876RQU
released
Annotation file set
: enhancer-gene predicton of erythroblast-Corces2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR519OVI
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of nonclassical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR617WXQ
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of erythroblast
Lab:
AMP-T2D consortium
Project:
AMP