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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
4
Target gene links
1
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
in vitro differentiated cells
Biosample term
11
liver
6
HepG2
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
5
hepatocyte
4
aorta
3
coronary artery
3
fibroblast of pulmonary artery
2
HuH-7
2
ascending aorta
2
dermis blood vessel endothelial cell
2
hepatic stellate cell
2
pulmonary artery endothelial cell
2
smooth muscle cell of the coronary artery
2
thoracic aorta
2
tibial artery
1
HuH-7.5
1
aortic endothelial cell
1
aortic smooth muscle cell
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
right lobe of liver
1
vein endothelial cell
Organ
5
epithelium
5
liver
0
blood vessel
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
1
February, 2021
1
May, 2021
1
November, 2021
Software used
2
abc
2
r
1
macs
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
organ_slims!
lymph node
Showing 5 of 5 results
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Download
FileSet
DSR926ULW
released
Annotation file set
: Target gene predictions for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR361WHM
released
Annotation file set
: Target gene predictions for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR943ZIF
released
Annotation file set
: Target gene predictions of Hepatocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR687WXO
released
Annotation file set
: Binding sites annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR604IOP
released
Annotation file set
: enhancer-gene predicton of hepatocyte-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP