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Citing CMDGA
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Annotation type
8
accessible chromatin
6
gene expression
3
differential activity
3
target gene predictions
2
binding sites
2
histone modifications
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
ChIP-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
6
endothelial cell of hepatic sinusoid
5
keratinocyte
4
endothelial cell
4
mammary epithelial cell
3
choroid plexus epithelial cell
3
endothelial cell of umbilical vein
3
enterocyte
3
hepatocyte
3
mammary gland epithelial cell
3
pancreatic ductal cell
2
bronchial epithelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
goblet cell
2
retinal pigment epithelial cell
2
tracheal epithelial cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
EndoC_BH1
1
Liver fetal (hepatocyte)
1
aortic endothelial cell
1
bronchial goblet cell
1
cortical cell of adrenal gland
1
dermis lymphatic vessel endothelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of coronary artery
1
epithelial cell of prostate
1
foreskin keratinocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney epithelium
1
kidney glomerular epithelial cell
1
luminal epithelial cell of prostatic duct
1
meso-epithelial cell
1
mesothelial cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
pulmonary artery endothelial cell
1
renal connecting tubule
1
renal cortical epithelial cell
1
thyroid follicular cell
1
type II pneumocyte
1
vein endothelial cell
Organ
3
epithelium
3
pancreas
0
breast
Date released
2
February, 2021
1
February, 2024
Software used
2
macs
1
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
month_released!
September, 2022
Showing 3 of 3 results
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Download
FileSet
DSR407MJH
released
Annotation file set
: Binding sites annotation for Pancreas PDAC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR780WQM
released
Annotation file set
: Binding sites annotation for Pancreas HPDE6 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR515RDR
released
Annotation file set
: Variant allelic effects annotation of Ductal cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP