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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
36
candidate regulatory elements
21
chromatin state
18
accessible chromatin
18
gene expression
18
target gene predictions
14
eQTL
5
binding sites
5
histone modifications
2
Fine-mapped variants
2
sQTL
2
variant allelic effects
2
variant to gene
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
9
breast cancer cell
7
melanoma
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
5
prostate cancer cell line
4
glioblastoma multiforme cancer stem cell
4
keratinocyte
4
neural progenitor cell
4
neuroblastoma cell
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
liposarcoma
3
mammary epithelial cell
3
neuronal stem cell
3
synovial sarcoma cell
3
triple-negative breast cancer
2
Burkitt's lymphoma
2
COLO-320 cell
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
HS-SY-2 cell
2
HepG2
2
Jurkat
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
SK-MEL-5 cell
2
SUM-185PE cell
2
T-lymphocyte
2
Th1 cell
2
adult acute myeloid leukemia
2
bronchial epithelial cell
2
cardiac muscle cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
diffuse large B-cell lymphoma
2
endothelial cell
2
erythroid progenitor cell
2
esophageal squamous cell carcinoma
2
foreskin fibroblast
2
gastric cancer cell
2
immortal neural cell line cell
2
islet of Langerhans
2
leukemic stem cell
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
mammary gland epithelial cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
neuroblastoma cell line
2
osteoblast
2
osteosarcoma
2
pancreatic cancer cell
2
pancreatic cell line
2
pancreatic ductal cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate derived cell line
2
prostate gland
2
tracheal epithelial cell
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A2780 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
Adipose stromal cell
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
1
B-lymphoblast
1
B-lymphoblastoid cell line
1
B-lymphocyte
1
BCBL-1 cell
1
BE(2)-C
1
BEAS-2B cell
1
BEL-7402 cell
1
BG03
1
BICR 31
1
BJ cell
1
BJAB cell
1
BL-2 cell
1
BL-41 cell
1
BPE cell
1
BT-20 cell
1
BT-474 cell
1
BT-549 cell
1
BeWo cell
1
BxPC-3 cell
1
C666-1 cell
1
CA46 cell
1
CAL-51 cell
1
CCLP-1 cell
1
CCRF-CEM cell
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD8-Positive T-Lymphocytes
1
CFPAC-1 cell
1
CHL-1 cell
1
CHLA-90 cell
1
CHP-134 cell
1
CMK
1
COLO 741 cell
1
COLO-800 cell
1
COLO-829 cell
1
COLO205
1
CTV-1 cell
1
CaSki cell
1
Caco-2 cell
1
Caki-1 cell
1
Calu-1 cell
1
Calu-3 cell
1
D283 Med cell
1
D341 Med cell
1
DK cell
1
DLD-1 cell
1
DND-41 cell
1
DOHH-2 cell
1
DU 145 cell
1
Daoy
1
Daudi
1
Detroit562
1
EAhy 926 cell
1
ECC-1
1
EM-3 cell
1
EOL-1 cell
1
EndoC_BH1
1
FaDu cell
1
Farage cell
1
G-401 cell
1
GM00011
1
GM06170
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12866
1
GM12867
1
GM12868
1
GM12869
1
GM12870
1
GM12871
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM13976
1
GM13977
1
GM15510
1
GM17212
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
GRANTA-519 cell
1
H1-hESC
1
HAC cell
1
HAP-1
1
HBL-1 cell
1
HBMEC cell
1
HCC-827 cell
1
HCC-95 cell
1
HCC1143 cell
1
HCC1395 cell
1
HCC1428 cell
Organ
2
connective tissue
2
pancreas
2
penis
2
skin of body
1
kidney
Date released
4
February, 2021
October, 2022
1
March, 2020
Software used
4
macs
1
spp
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
biosample_term_name!
liposarcoma
month_released!
October, 2022
Showing 5 of 5 results
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Download
FileSet
DSR081BPN
released
Annotation file set
: Binding sites annotation for Pancreas Pancreatic_islets from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073IHA
released
Annotation file set
: Binding sites annotation for Epidermis HFF-Myc from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR131VXM
released
Annotation file set
: Binding sites annotation for Epidermis HFF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR883333
released
Annotation file set
: Islet TF binding sites (PDX, MAFB, NKX2.2, NKX6.1, FOXA2)
Lab:
Kyle Gaulton, UCSD
Project:
AMP