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Annotation type
  • 9candidate regulatory elements
  • 4chromatin state
  • 4target gene predictions
  • 3binding sites
  • 2accessible chromatin
  • 2eQTL
  • 1gene expression
  • 1histone modifications
Annotation Category
  • 3cis-regulatory elements
Annotation type Category
  • 3ChIP-seq
Available data
  • 3bed bed3+
File set status
  • 3released
Genome assembly (visualization)
  • 3hg19
Organism
  • 3Homo sapiens
Biosample type
  • 2cell line
  • 1tissue
Biosample term
  • 2NT2-D1 cell
  • 1testis
Organ
  • 46bodily fluid
  • 45blood
  • 43epithelium
  • 31connective tissue
  • 21vasculature
  • 18skin of body
  • 16blood vessel
  • 16brain
  • 13embryo
  • 13liver
  • 12lymph node
  • 12mammary gland
  • 9lung
  • 8bone element
  • 8prostate gland
  • 7kidney
  • 7musculature of body
  • 7penis
  • 6artery
  • 6eye
  • 6intestine
  • 6large intestine
  • 5heart
  • 5pancreas
  • 4uterus
  • 3extraembryonic component
  • 3gonad
  • 3placenta
  • 3testis
  • 3vein
  • 2adipose tissue
  • 2bone marrow
  • 2bronchus
  • 2limb
  • 2lymphatic vessel
  • 2spinal cord
  • 2trachea
  • 1spleen
  • 1thymus
Date released
  • 2February, 2021
  • 1October, 2022
Software used
  • 2macs
  • 1chromhmm
Lab
  • 3AMP-T2D consortium
Project
  • 3AMP
Collection Tags
  • 2ChIP-Atlas
  • 1ENCODE
RFA
  • 3AMP

Showing 3 of 3 results

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  • FileSet

    DSR209NBR

    released

    Annotation file set: Binding sites annotation for NT2-D1 cell (NT2-D1) for GOLDENPATH ENCODE DCC
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR556ACO

    released

    Annotation file set: Binding sites annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR295KRU

    released

    Annotation file set: Binding sites annotation for Gonad Testis from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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