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Citing CMDGA
Clear Filters
Annotation type
823
chromatin state
361
accessible chromatin
target gene predictions
119
eQTL
104
histone modifications
63
Fine-mapped variants
36
candidate regulatory elements
5
gene expression
4
caQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
2
ATAC-seq
2
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
6
hg19
4
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
CD4-positive helper T cell
1
endothelial cell
1
macrophage
Organ
3
blood vessel
vasculature
2
artery
2
heart
1
connective tissue
1
epithelium
Date released
2
February, 2023
2
October, 2022
Software used
2
matrix-eQTL
2
rasqual
Lab
2
AMP-T2D consortium
2
Stephen S. Rich Lab @UVA
Project
2
AMP
2
T1D
RFA
2
AMP
2
T1D
annotation_type!
target gene predictions
organ_slims!
adrenal gland
vasculature
Showing 4 of 4 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D