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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
37
heart
11
heart left ventricle
7
K562
6
heart right ventricle
4
coronary artery
4
peripheral blood mononuclear cell
3
cardiac fibroblast
3
fibroblast of cardiac tissue
3
right atrium auricular region
2
CMK
2
GM06990
2
GM12875
2
GM12878
2
HAP-1
2
HL-60
2
KBM-7
2
NAMALWA
2
NAMALWA cell
2
NB4
2
OCI-LY7
2
RPMI8226
2
endocardial cell
2
left cardiac atrium
2
right cardiac atrium
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
Karpas-422
1
smooth muscle cell of the coronary artery
Organ
4
artery
4
blood vessel
4
heart
4
vasculature
0
blood
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
1
February, 2023
Software used
2
r
1
encode-ccres
1
rasqual
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
large intestine
stomach
Showing 4 of 4 results
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Download
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010DRV
released
Annotation file set
: Candidate regulatory elements for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR401LNJ
released
Annotation file set
: Candidate regulatory elements for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019RRW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE coronary artery
Lab:
AMP-T2D consortium
Project:
AMP