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Citing CMDGA
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Annotation type
17
accessible chromatin
7
target gene predictions
2
binding sites
2
caQTL
2
eQTL
2
gene expression
2
variant allelic effects
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
2
Gene expression levels
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
2
snRNA-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
endothelial cell
2
mesenchymal stem cell
2
skeletal muscle fiber
2
smooth muscle cell
2
type I muscle cell
2
type II muscle cell
1
adipocyte
1
glial cell
1
leukocyte
1
neural cell
1
skeletal muscle satellite cell
Organ
2
connective tissue
2
epithelium
Date released
2
February, 2024
2
October, 2022
Software used
2
deeptools
2
eigenmt
2
r
2
rasqual
2
samtools
2
umitools
Lab
4
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP2
Showing 4 of 4 results
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FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR543XVO
released
Annotation file set
: Cell type gene expression mean TPM and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP