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Schema
Citing CMDGA
Clear Filters
Annotation type
14
gene expression
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
0
caQTL
Annotation Category
1
Genetic variant effects
1
Target gene links
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
22
heart
21
stomach
19
A549
19
CD14-positive monocyte
19
HFFc6
17
adrenal gland
17
brain
17
lung
17
muscle of arm
17
small intestine
15
kidney
15
placenta
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
endothelial cell
13
left lung
13
muscle of back
12
B cell
12
fibroblast
11
liver
11
pericyte cell
11
right kidney
11
right lung
10
hematopoietic multipotent progenitor cell
10
macrophage
10
pituitary stalk
10
renal cortex interstitium
10
renal pelvis
10
smooth muscle cell
9
CD4-positive, alpha-beta memory T cell
9
adipose tissue
9
heart left ventricle
9
left kidney
8
GM12878
8
H9
8
adipocyte
8
psoas muscle
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
hepatocyte
7
lymphocyte
7
natural killer cell
7
sigmoid colon
7
trophoblast cell
MCF-7
6
T cell
6
body of pancreas
6
coronary artery
6
dendritic cell
6
heart right ventricle
6
keratinocyte
6
mononuclear cell
6
olfactory receptor cell
6
ovary
6
pancreas
5
CD8-positive, alpha-beta T cell
5
endothelial cell of umbilical vein
5
gastrocnemius medialis
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
muscle of trunk
5
neural progenitor cell
5
pancreatic delta cell
5
thyroid gland
5
tibial nerve
5
transverse colon
4
CD4-positive helper T cell
4
CyT49
4
HUES8
4
aorta
4
astrocyte
4
cardiac muscle cell
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
iPSC derived cell line
4
mast cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic ductal cell
4
regulatory T cell
4
retina
4
right atrium auricular region
4
skeletal muscle myoblast
4
tibial artery
3
CD4-positive, alpha-beta T cell
3
HCT116
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
basal cell
3
breast epithelium
3
chorion membrane
3
cortical cell of adrenal gland
3
endometrium adenocarcinoma
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
esophagus
3
foreskin fibroblast
3
frontal cortex
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
luminal epithelial cell of mammary gland
3
mesendoderm
3
monocyte
3
myofibroblast cell
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
skin fibroblast
3
testis
3
thoracic aorta
3
trophoblast
3
type B pancreatic cell
3
type II pneumocyte
3
upper lobe of left lung
2
cardiac fibroblast
2
muscle of leg
2
22Rv1
2
A673
2
Ammon's horn
2
BJAB cell
2
Brodmann (1909) area 46
2
EndoC_BH1
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MIN6
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SK-N-DZ
2
Schwann cell
2
T-cell
2
T47D
2
THP-1
2
U937
2
activated CD4-positive, alpha-beta T cell
2
angular gyrus
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
bipolar neuron
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac precursors (cardiac muscle cell)
2
cerebellum
2
choroid plexus epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endocardial cell
2
endodermal cell
2
endothelial cell of lymphatic vessel
2
enteric smooth muscle cell
2
epithelial cell of proximal tubule
2
erythroblast
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
Organ
2
epithelium
2
kidney
Life stage
1
unknown
Date released
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
MCF-7
Showing 2 of 2 results
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Download
FileSet
DSR373GGH
released
Annotation file set
: Target gene predictions for BSS00387 glomerular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR275CPF
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney glomerular endothelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP