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Citing CMDGA
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Annotation type
1551
candidate regulatory elements
982
target gene predictions
841
histone modifications
768
binding sites
414
accessible chromatin
390
gene expression
98
variant allelic effects
74
differential activity
69
chromatin state
15
eQTL
5
hQTL
4
caQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Annotation Category
4
Genetic variant effects
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
epithelium
liver
Date released
4
October, 2022
Software used
4
eigenmt
4
rasqual
Lab
4
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP2
assembly!
GRCh38
month_released!
August, 2021
organ_slims!
epithelium
liver
Showing 4 of 4 results
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FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP