Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1540
candidate regulatory elements
986
target gene predictions
848
histone modifications
774
binding sites
430
gene expression
160
accessible chromatin
96
variant allelic effects
75
differential activity
72
chromatin state
42
eQTL
5
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Annotation Category
5
Genetic variant effects
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
1
liver
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
epithelium
1
liver
Date released
4
October, 2022
1
May, 2022
Software used
5
eigenmt
5
rasqual
Lab
4
Stephen Parker, UMich
1
Karen Mohlke, UNC
Project
5
AMP
RFA
4
AMP2
1
AMP
assembly!
GRCh38
month_released!
June, 2020
organ_slims!
epithelium
ureter
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP