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Schema
Citing CMDGA
Clear Filters
Annotation type
1577
candidate regulatory elements
1169
target gene predictions
975
histone modifications
893
chromatin state
815
binding sites
588
accessible chromatin
507
gene expression
161
eQTL
131
variant allelic effects
65
Fine-mapped variants
47
differential activity
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
2
other
1
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
6
Genetic variant effects
Annotation type Category
5
snATAC-seq
1
ATAC-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Biosample term
1
endothelial cell
1
liver
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
1
liver
Date released
February, 2023
5
October, 2022
1
May, 2022
Software used
6
eigenmt
6
rasqual
Lab
5
Stephen Parker, UMich
1
Karen Mohlke, UNC
Project
6
AMP
2
T1D
RFA
5
AMP2
1
AMP
month_released!
February, 2023
November, 2019
organ_slims!
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Showing 6 of 6 results
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FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP