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Annotation type
14
accessible chromatin
10
eQTL
4
target gene predictions
3
candidate regulatory elements
3
variant allelic effects
2
caQTL
2
gene expression
1
Fine-mapped variants
1
binding sites
1
histone modifications
Annotation Category
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
3
endothelial cell
2
CD4-positive helper T cell
2
macrophage
2
smooth muscle cell
1
T cell
1
adipocyte
1
coronary artery
1
fibro-adipogenic progenitor cell
1
fibroblast of the aortic adventitia
1
liver
1
mesenchymal stem cell
1
neural cell
1
neuromuscular junction nucleus
1
skeletal muscle satellite cell
1
smooth muscle cell of the coronary artery
1
type 1 muscle cell
1
type 2a muscle cell
1
type 2x muscle cell
1
type I muscle cell
1
type II muscle cell
Life stage
1
adult
Date released
1
February, 2023
1
July, 2025
Software used
1
qTLtools
1
rasqual
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
Collection Tags
1
CMDGA
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR088PNU
released
Annotation file set
: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP